Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01333 ATGCTTCAACTGGTTCTGAGGCGACGAGGGGTGGTATTTTGGACTAGTGGgcaattgaaaaatcaaagcttTGAAAACATGATAGAAGCAGATACTAATTTCGTGGAGAATTATAACATGATCCATGAAAGGAATTCAGGTGAGGAATTCTTCAGTTATTCTCTGAAAGAGGATCATCCTACTAGTGGGAATCACCAAGAAGTAAAATGGAGAATTGGATTTCGCAGCACCATATGGTTTGAGGATGTAGGTCTGCCATTGGAGAACATATGTTATGGGTACAATACAGATAGAGGATGTGCAGAATGGACACAGCCAGAATGCAGAAGTGACAAGCCAATATTTGTGTCCCGGTCTGGGTTTTTCCGTGGCCTTACGCCAAATGATAGTAACAATCAGATTTTTAACAATGATAAAAGCCTTGGCCCTGGTGATTGTAGAGCAATTTGCTGGAATGACTGTGATTGTTTGGGCTATCTGAAAAATTCTAGTAATGGATGCATCATGTGGAGAGGACAGCTTCAGTTTGAACCAGATTCTAGTCAAGCTGCACCTACTATATTCGTTATAAGCAACCAGACTGATACAGCTGATAGCAGCAACCAAGGGCGGAGGGCAAGAAGCAAAAAATGGATATGGGTTGCAGCCGCTGTTCCAAGTTCGATTGTAGCTTGTGTTGCTGTCATCATATTCCTCGTATGCAGAAAACAGAAAGGggacaaagagaaaaattacctAGCTCGAATGACAAGATCGGATAGATTAGGAGATGCAACCGAGTTCGAAAATGATGGAAACATTGATGGTAATCTGAAAGTGTTTTGCTTTGAATCAATATCTGAAGCTACAAACAACTTTTCAGAAGATAATAAACTTGGAGAGGGTGGATTTGGTCCTGTCTTTAAGGGAACATTCCTTGGAGGACAAAATGAATTGATTGCAAGAACTAGCAAAGTTGTCGGTACCTACGGTTACATGTCCCCTGAGTACGGAATGCAAGGAATTTTCTCTACAAAATCAGATATTTTTAGCTTTGGAGTCTTGTTGCTTGAAATAGTGAGTGGCAAAAGGAACAACAGTTTTCATGACAACAATGGGCCTCTAAATCTTGTAGGATATGCATGGGACTTGTGGCAGAGTGGTGATGAGGCAGAGCTGATGGATCCTACATTAAGAGATTCATGCAATACAAAGCAATTGGTTAGATATATTCATGTGGGTCTTTTGTGCGTGGAAGATTCTCCAGCAGACAGACCAACCATTTCAGAAGTGATTACTATGATAACAAATGAAAGAACCCTTCTTCCAATGCTGAAAAAACCAGCATTTCTGAATTTGAGCACTGCCATTAATGGGGGTTCTAAGGGGAATGAGTTAGAATACCAGTCGGTGAATGGCTTCTCTACTTCTATTGTGTATGCCAGATG 1427 0.3994 MLQLVLRRRGVVFWTSGQLKNQSFENMIEADTNFVENYNMIHERNSGEEFFSYSLKEDHPTSGNHQEVKWRIGFRSTIWFEDVGLPLENICYGYNTDRGCAEWTQPECRSDKPIFVSRSGFFRGLTPNDSNNQIFNNDKSLGPGDCRAICWNDCDCLGYLKNSSNGCIMWRGQLQFEPDSSQAAPTIFVISNQTDTADSSNQGRRARSKKWIWVAAAVPSSIVACVAVIIFLVCRKQKGDKEKNYLARMTRSDRLGDATEFENDGNIDGNLKVFCFESISEATNNFSEDNKLGEGGFGPVFKGTFLGGQNELIARTSKVVGTYGYMSPEYGMQGIFSTKSDIFSFGVLLLEIVSGKRNNSFHDNNGPLNLVGYAWDLWQSGDEAELMDPTLRDSCNTKQLVRYIHVGLLCVEDSPADRPTISEVITMITNERTLLPMLKKPAFLNLSTAINGGSKGNELEYQSVNGFSTSIVYAR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01333 475 SUPERFAMILY Protein kinase-like (PK-like) 315 444 IPR011009 -
Bva11g01333 475 Pfam PAN-like domain 138 174 IPR003609 -
Bva11g01333 475 Gene3D Transferase(Phosphotransferase) domain 1 268 436 - -
Bva11g01333 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 143 310 - -
Bva11g01333 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 308 455 - -
Bva11g01333 475 Pfam Protein tyrosine and serine/threonine kinase 321 426 IPR001245 GO:0004672|GO:0006468
Bva11g01333 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-7 143 310 - -
Bva11g01333 475 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-7 308 455 - -
Bva11g01333 475 SUPERFAMILY Protein kinase-like (PK-like) 268 309 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01333 Bva-Chr11 13554652 13557951 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01333 291 443 Receptor kinase-like Gene Family AT4G23230 45.098 1.99e-42 157
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Bva11g01333 PK_Tyr_Ser-Thr 1.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01333 - - qsu:112019823 208.764