Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01332 ATGGCGGCAACCTTAAACAACTACACTGACAGCGATAGCTCAGAAAACAATAGTAGCCAAGAAACTTACCCTAATTGGTATTCACCAGAAACAGGAATTTACTATAGCAAACATGTTTCTTTAGACCTTCCTAATGACCCTTTTCTTGACACtgtttccttcattttttctcaCCGCCATAATGGGGCTTCTGCTCTCATTGATTCCTCAACTGGGCATTCAATCTCTTACCCAGAATTGTTTTCTATGGTTAAATCCATGGCATTTGGTCTCCACGAAATGGGTATTTCACAAGGTGATGttgttcttcttctaattCCTAATTCCATTTACTATTCCGTTGTTTTATTGGGTGTTCTCTATCTTGGCGCCATTGTTACACCATTAAATCCTCTCAGTAGTGTGTCAGAAATCCGGAAACACATTGCTGATTGTGATGTGAGTCTGGCTTTTACTGTACCAGAACAAGTTAAGAAACTACAGCCATCGGGGATTCCCATTATTGAAGTGCCAGAAAATATGAAGGATTTGAAGCATGTTTGTTTCTCAAGTTTTTTCAACCTTATTTCTGGGAGTTTTGATTTGCTTTCAAGGCCAGTGATTAAACAGGAAGACACGGCAGCTATAATGTATTCTTCAGGGACTACAGGTGTAAGCAAAGGAGTTGTTCTAACacataagaatttaatttccatGGTTCAGCTTTTTGTGAGGTTTGAAGCTTCTCAACACGAATATTCAAGCTCCAAAAATGTCTTTCTAGCTGTTCTGCCTATGTTCCATATATACGGTTTATCACTCTTTGCTATAGGATTACTGTCTTTGGGTTCTACTGTTATTGTACTGAGGAAATTTGACATCAATGAGGTGATCAAGGCGATTGACAAATATAAAGTTACACACTTTCCCGTTGTTCCGCCGATATTGACAGCACTGACAAAGAGGTTAAAGGGTAGTAGTGGAAGTAATTTGCAGAGTTTGATACAGGTCTCATGTGGAGCAGCGCCTTTGAGCAGAAAAATTATAGAGGGCTTTGTTCAGACTCTCCCTCACGTTGATTTTATACAGCAAAGAATAAGATTTTGTGTCATTGAGCCATTGTTATCAGTACAGACTAGAAAGACTGGCCGGCCAATTTCAAACTTAGCTTTTCTATTGGTATTGggcTATGGAATGACTGAGTCAACTGCTGTCGGAACACGCGGCTTCAATACTGAAAAGTTTCGAAATTATTCTTCAATAGGATTGTTAGCCCCAAACATGGAAGCTAAAGTGGTAGATTGGAACACTGGTAGTTCTATGCCCCCAGGCAGCAGTGGTGAGCTTTGGTTGAGAGGACCTGCAATCATGAGAGGATATTTGAACAATGAGTTAGCCACACTGTCAACAATTGATAAAGATGGTTGGCTACGCACTGGAGatgttgtttattttgatcaaGATGGGTATTTGTATATATCTGACCGTTTGAAAGATATCATCAAATACAAGGGCTTTCAGATTGCTCCTGCTGATTTAGAAGATGTGTTAATGTGGCATCCTGAGGTAGTTGATGCTGCTGTCGCTGGtgTCATGGATGAAGAAAGTGGGGAGATTCCAGTAGCATTTGTGGTCAGGAAGATTGGAAGCGTGCTCTCTCATGAGGCTATTATGGACTATGTCGCTGAGCAGGTTGCTCCTCATAAGAAGATCAGGAAAGTGGTGTTTACTGACTCAATACCAAGGTCTGCGGCTGGAAAGATCCTTCGAAGGCAGACAAGAAAATGCTTGACATCTAAACTCTG 1784 0.3935 MAATLNNYTDSDSSENNSSQETYPNWYSPETGIYYSKHVSLDLPNDPFLDTVSFIFSHRHNGASALIDSSTGHSISYPELFSMVKSMAFGLHEMGISQGDVVLLLIPNSIYYSVVLLGVLYLGAIVTPLNPLSSVSEIRKHIADCDVSLAFTVPEQVKKLQPSGIPIIEVPENMKDLKHVCFSSFFNLISGSFDLLSRPVIKQEDTAAIMYSSGTTGVSKGVVLTHKNLISMVQLFVRFEASQHEYSSSKNVFLAVLPMFHIYGLSLFAIGLLSLGSTVIVLRKFDINEVIKAIDKYKVTHFPVVPPILTALTKRLKGSSGSNLQSLIQVSCGAAPLSRKIIEGFVQTLPHVDFIQGYGMTESTAVGTRGFNTEKFRNYSSIGLLAPNMEAKVVDWNTGSSMPPGSSGELWLRGPAIMRGYLNNELATLSTIDKDGWLRTGDVVYFDQDGYLYISDRLKDIIKYKGFQIAPADLEDVLMWHPEVVDAAVAGVMDEESGEIPVAFVVRKIGSVLSHEAIMDYVAEQVAPHKKIRKVVFTDSIPRSAAGKILRRQTRKCLTSKL 562
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01332 562 MobiDBLite consensus disorder prediction 1 24 - -
Bva11g01332 562 Gene3D - 32 459 IPR042099 -
Bva11g01332 562 SUPERFAMILY Acetyl-CoA synthetase-like 57 558 - -
Bva11g01332 562 Pfam AMP-binding enzyme 59 464 IPR000873 -
Bva11g01332 562 PANTHER 4-COUMARATE--COA LIGASE-LIKE 6 19 561 - -
Bva11g01332 562 CDD 4CL 43 553 - -
Bva11g01332 562 Gene3D - 460 561 IPR045851 -
Bva11g01332 562 Pfam AMP-binding enzyme C-terminal domain 474 548 IPR025110 -
Bva11g01332 562 ProSitePatterns Putative AMP-binding domain signature. 209 220 IPR020845 -
Bva11g01332 562 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 19 561 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01332 Bva-Chr11 13550212 13554388 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01332 15 562 Monolignol Biosynthesis Gene Families AT4G19010 59.455 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01332 K01904 - gmx:100804808 816.224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01332 11 13550212 13554388 Bva11g01332 11 13550212 13554388 ECH