Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01329 atggcagtTTGCACAGTCTACACAGCACAAACACTCAATACCAATTGCTCCATCTCCGCACCATCAAAAACCCATTTGAGTTTCCATCAAAAGCAGCTAGTTTTCTACACTACAAGCAAGAAAAGCTGCAAAAGAGGCAGCAATTACAGTGGCAGCCCATGTGTGATAACATGTGCTGCAGGTGACTCACAGACAGTGGTGATTGGTCTAGCAGCAGATTCAGGGTGTGGGAAGAGTACTTTCATGAGAAGGCTTACCAGTGTGTTTGGAGGAAAAGCAGAACCACCCAAAGGTGGCAACCCAGATTCCAACACTCTGATAAGTGACACCACCACAGTGATATGCTTGGATGATTATCATTCATTGGATAGAACAGGGAGAAAAGAGAAGGGTGTCACTGCACTTGACCCAAGAGCCAACGATTTTGATCTTATGTATGAGCAAGTTAAGGCTATTAAAGAAGGAATTGCTGTGGAGAAGCCCATTTACAACCATGTCACTGGCCTCTTGGATCCACCAGAGCTTATTAAACCACCCAAAATCTTAGTCATTGAAGGTTTGCATCCAATGTTTGACCCTCGGGTAAGAGATCTTTTGGACTTCAGCATTTACCTAGACATCAGCAATGAGGTCAAATTCGCTTGGAAAATTCAGAGAGACATGGCAGAGCGTGGGCACAGCCTTGAGAGCATTAAAGCTAGCATTGAAGCTAGGAAGCCTGATTTTGATGCTTATATTGATCCCCAAAAGCAATATGCAGATGCAGTGATAGAAGTGTTGCCAACCCAACTCATTCCAGACGACAATGaaggaaatattttgagaGTGAAGTTGATACAGAAAGAAGGGGTTAAGTATTTTAGCCCTGTTTACTTGTTTGATGAAGGCTCCACCATTTCTTGGATACCGTGTGGAAGGAAACTCACCTGCTCTTACCCTGGCATCAAGTTCTTCTATGGACCAGACGCTTACTTTGGTCATGAGGTGTCTGTTGTAGAAATGGATGGGCAATTTGACAGATTAGATGAGCTAATATACGTAGAGAGCCATCTAAGCAGCCTCTCAAGCAAGTTCTATGGAGAAGTTACTCAACAGATGTTGAAGCATGCTGACTTCCCTGGAAGCAACAACGGGACAGGTCTCTTCCAAACCATAATCGGTTTGAAGATAAGAGATTTATTTGAACAGATTGTAGCCAGCAAGAGTGGTACTCCAGTAGGAGCAGCAAAAGCTTA 1235 0.43 MAVCTVYTAQTLNTNCSISAPSKTHLSFHQKQLVFYTTSKKSCKRGSNYSGSPCVITCAAGDSQTVVIGLAADSGCGKSTFMRRLTSVFGGKAEPPKGGNPDSNTLISDTTTVICLDDYHSLDRTGRKEKGVTALDPRANDFDLMYEQVKAIKEGIAVEKPIYNHVTGLLDPPELIKPPKILVIEGLHPMFDPRVRDLLDFSIYLDISNEVKFAWKIQRDMAERGHSLESIKASIEARKPDFDAYIDPQKQYADAVIEVLPTQLIPDDNEGNILRVKLIQKEGVKYFSPVYLFDEGSTISWIPCGRKLTCSYPGIKFFYGPDAYFGHEVSVVEMDGQFDRLDELIYVESHLSSLSSKFYGEVTQQMLKHADFPGSNNGTGLFQTIIGLKIRDLFEQIVASKSGTPVGAAKA 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01329 411 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 64 336 IPR027417 -
Bva11g01329 411 CDD PRK 67 355 - -
Bva11g01329 411 PRINTS Phosphoribulokinase family signature 72 89 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bva11g01329 411 PRINTS Phosphoribulokinase family signature 234 257 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bva11g01329 411 PRINTS Phosphoribulokinase family signature 181 199 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bva11g01329 411 PRINTS Phosphoribulokinase family signature 216 233 IPR006082 GO:0005524|GO:0005975|GO:0008974
Bva11g01329 411 Gene3D - 62 292 IPR027417 -
Bva11g01329 411 PANTHER PHOSPHORIBULOKINASE 7 411 - -
Bva11g01329 411 Pfam Phosphoribulokinase / Uridine kinase family 67 265 IPR006083 GO:0005524|GO:0016301
Bva11g01329 411 PANTHER URIDINE KINASE 7 411 - -
Bva11g01329 411 ProSitePatterns Phosphoribulokinase signature. 216 229 IPR006082 GO:0005524|GO:0005975|GO:0008974
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01329 Bva-Chr11 13539610 13542271 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01329 119 293 PRT Gene Family AT3G27440 27.528 3.83e-17 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01329 K00855 - jre:109008315 749.969
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01329 11 13539610 13542271 Bva11g01329 11 13539610 13542271 ECH