Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01319 ATGGGTAGCAGTGAGATGGATAAAACCCCGAAAGAAAAGGAGTCAAAGACGCCTCCTGCTACGTCACAGGAGCAATCTTCAACCACAAGCACTGGAACAATTAACGCTGAGTGGTCTAGCTTCCAGGCATATTCTCCTATACCTCCACATGGGTTTTTGGCATCAAGTCCCCAAGCCCACCCATATATGTGGGGCGTGCAGCATATTATGCCTCCGTATGGTACCCCACCACATCCGTATGTTGCAATGTATCCCCATGGTGGCATATATGCTCATCCTTCCATGCCTCCGGGATCTTATCCTTTTAGTCCTTTTGCCATGCCTTCTCCAAATGGTATTGCCGATGCTTCAGGAACTACTCCTGGCAGCATGGAAGCTGATGGTAAACTTCCTGAGGTGAAGGAAAAATTGCCCATCAAAAGATCAAAAGGAAGTTTGGGTAGTTTGAATATGATTACAGGGAAGAATAATGAACTTGGTAAATCACCAGGGACGTCTGCAAATGGAATTCATTCAAAAAGTGGTGACAGTGCAAGTGAAGGATCTAGTGAAGGAAGTGATGCAAATTCTGACAATGAGTCTCCAATGAACTCAGGGGGCAGGCAGGATGCTTTGGAAGATGAACCATCTCAAAATGGTGGTTCGGTGCATGTTCCTCAAAACGGTGGACCTAAAACTCCTCGTACAATGGTAAATCAATCAATGGCTGTTGTACCTATGTCTGCTGCTGGTGTTCCAGCAGCCATTCCCGGTCCCACCACAAACTTAAATATAGGAATGGATTATTGGGGTGCACCAACTTCATCGACTATTCCTTTGCGTGGAAAGGTTCCTTCTCCTGCAGTTGCTGGAGGGATGGTTACTGCTGGATCACGAGATAGTGTCCAGTCACAACTTTGGATACAGGATGAAAGAGAGCTTAAACGACAAAGGCGGAAGCAGTCTAATCGGGAATCTGCTCGAAGATCAAGGTTGCGCAAACAGGCAGAATGTGATGAACTAGCTCAACGAGCTGAGGctttggaagaagaaaatacgACACTTCGATTAGAAGTCAATAGGATCAGGAGTGAGTATGAGCAGCTGCTCTCAGAGAATGCTGCCCTCAAGGAGAGACTTGGAGAAGTACCAGGAAACGAGGATATTAAGTCTGGCAAGAGTGATCAACATTCAGGGAATGACAGTCAACAACAGGCTGCGCGAACAGAGGGTGGTCACTA 1220 0.4598 MGSSEMDKTPKEKESKTPPATSQEQSSTTSTGTINAEWSSFQAYSPIPPHGFLASSPQAHPYMWGVQHIMPPYGTPPHPYVAMYPHGGIYAHPSMPPGSYPFSPFAMPSPNGIADASGTTPGSMEADGKLPEVKEKLPIKRSKGSLGSLNMITGKNNELGKSPGTSANGIHSKSGDSASEGSSEGSDANSDNESPMNSGGRQDALEDEPSQNGGSVHVPQNGGPKTPRTMVNQSMAVVPMSAAGVPAAIPGPTTNLNIGMDYWGAPTSSTIPLRGKVPSPAVAGGMVTAGSRDSVQSQLWIQDERELKRQRRKQSNRESARRSRLRKQAECDELAQRAEALEEENTTLRLEVNRIRSEYEQLLSENAALKERLGEVPGNEDIKSGKSDQHSGNDSQQQAARTEGGH 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01319 406 CDD bZIP_plant_GBF1 309 359 IPR045314 GO:0003700|GO:0006355
Bva11g01319 406 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 399 IPR044827 GO:0003700|GO:0006355|GO:0043565
Bva11g01319 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 306 369 IPR004827 GO:0003700|GO:0006355
Bva11g01319 406 Coils Coil 324 372 - -
Bva11g01319 406 MobiDBLite consensus disorder prediction 115 229 - -
Bva11g01319 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 311 326 IPR004827 GO:0003700|GO:0006355
Bva11g01319 406 MobiDBLite consensus disorder prediction 306 330 - -
Bva11g01319 406 Gene3D - 307 361 - -
Bva11g01319 406 PANTHER BZIP TRANSCRIPTION FACTOR FAMILY PROTEIN 1 399 - -
Bva11g01319 406 Pfam bZIP transcription factor 304 366 IPR004827 GO:0003700|GO:0006355
Bva11g01319 406 Pfam Disordered region downstream of MFMR 135 272 - -
Bva11g01319 406 MobiDBLite consensus disorder prediction 374 388 - -
Bva11g01319 406 MobiDBLite consensus disorder prediction 1 18 - -
Bva11g01319 406 SMART brlzneu 304 368 IPR004827 GO:0003700|GO:0006355
Bva11g01319 406 MobiDBLite consensus disorder prediction 370 406 - -
Bva11g01319 406 MobiDBLite consensus disorder prediction 146 219 - -
Bva11g01319 406 MobiDBLite consensus disorder prediction 19 34 - -
Bva11g01319 406 Pfam G-box binding protein MFMR 1 96 IPR012900 -
Bva11g01319 406 SUPERFAMILY Leucine zipper domain 307 363 IPR046347 GO:0003700|GO:0006355
Bva11g01319 406 MobiDBLite consensus disorder prediction 1 34 - -
Bva11g01319 406 MobiDBLite consensus disorder prediction 389 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01319 Bva-Chr11 13490502 13496195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01319 1 400 bZIP Transcription Factor Family AT2G35530 63.235 3.01e-167 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Bva11g01319 MFMR_assoc 3.1e-58 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01319 K09060 - vvi:100243644 624.78
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01319 11 13490502 13496195 Bva11g01319 11 13490502 13496195 ECH