Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01311 ATGGAGCTATTCCCAGCACAGCCAGATTTGTCTTTGCAAATCAGCCCTCCAAACAGCAATCCCACTTCAGGTTGGAGGAGAAGTGCAGAAGAAGAGATGGATTTGGGGTTCTGGAAGAGAGCTTTGGAGTCCAGAAATTTAAATTCCCTATCATCAATGGCCAAAACTGCTGAAAACTGCTTTGAACTCTCACTCTCTAATCCAAGGGCTTCAGACTGCAACAACTCCAACCTCATTCATCACCACTTCCAAAATCATCATAATACCAATCCCTTGCAATCATTTCAACAAAACCACTACTCCCACCACCAACTACGCCATCAACCACTCTTCCAGCGCCAACCACAGTACCAGCACCACCAAAGCCTAAGCCAAGAACTGGGCTTTCTCAGACCCATAAGAGGAATTCCAGTGTACCAAAACCCTCCTCCTAATATCCCATTTGCTCAGCAGCCTCTAGAAGCTGCTTCTGCTCCTTCATCTCTATCTAATGGTACTACAACGACCACAAGCTCAAGCCCCTTTCAGTCTTCTCAAGGTTTGATGCGTTCAAGGTTCTTAACTAGGTTCCCAGCCAAAAGAAGCATGAGAGCTCCTCGGATGCGTTGGACAACTACTCTCCATTCTCGCTTTGTTCATGCTGTTGAGCTATTGGGTGGGCACGAAAGGGCTACACCCAAATCAGTTCTTGAGCTTATGGATGTGAAGGATCTAACTTTAGCTCATGTTAAATCTCATTTACAGATGTACCGGACAGTGAAGACCACAGATAGAGCAGCGGCTTCCTCAGGGCAATCAGATGTATATGATAATGGGTCTTCTGGAGATACGTCTGAAGACTTAATGTTCGACATGAATAATAATGCAAGCTGCAGATCTGATTTATCTATTAAGCAGGGAATATCAAGTGCTAATCAAGATAAGGATCAGTATCATGGGCTTTGGAGCAATTCTTCAAGGGAAGCTTGGTTGCATGGGAAGCCAAAGGTCATTGATTCTGCTGGAAACGTGCCTGCTCttgagAAGGAAATGGATCCAAAGAGCCTAAGTTATGAGAGAATATCAGATGGAAGCTCTTCCTCAAACATTTCAGGAACAAGCCCTAAGAAGCCTAATTTAGATTTGGAGTTCACCTTGGGGCAGCCATTAATTTG 1154 0.4445 MELFPAQPDLSLQISPPNSNPTSGWRRSAEEEMDLGFWKRALESRNLNSLSSMAKTAENCFELSLSNPRASDCNNSNLIHHHFQNHHNTNPLQSFQQNHYSHHQLRHQPLFQRQPQYQHHQSLSQELGFLRPIRGIPVYQNPPPNIPFAQQPLEAASAPSSLSNGTTTTTSSSPFQSSQGLMRSRFLTRFPAKRSMRAPRMRWTTTLHSRFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRTVKTTDRAAASSGQSDVYDNGSSGDTSEDLMFDMNNNASCRSDLSIKQGISSANQDKDQYHGLWSNSSREAWLHGKPKVIDSAGNVPALEKEMDPKSLSYERISDGSSSSNISGTSPKKPNLDLEFTLGQPLI 384
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01311 384 MobiDBLite consensus disorder prediction 155 180 - -
Bva11g01311 384 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 383 - -
Bva11g01311 384 SUPERFAMILY Homeodomain-like 196 252 IPR009057 -
Bva11g01311 384 MobiDBLite consensus disorder prediction 352 371 - -
Bva11g01311 384 Pfam Myb-like DNA-binding domain 200 251 IPR001005 -
Bva11g01311 384 Gene3D - 198 255 - -
Bva11g01311 384 MobiDBLite consensus disorder prediction 11 26 - -
Bva11g01311 384 MobiDBLite consensus disorder prediction 343 384 - -
Bva11g01311 384 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 1 383 IPR044847 GO:0000976|GO:0006355|GO:0010158
Bva11g01311 384 MobiDBLite consensus disorder prediction 1 28 - -
Bva11g01311 384 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 199 252 IPR006447 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01311 Bva-Chr11 13434189 13439032 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01311 1 382 G2-like Transcription Factor Family AT4G17695 35.507 1.87e-51 173
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva11g01311 Myb_DNA-binding 2.2e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01311 - - aprc:113868756 549.666
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01125 08 5766200 5771084 Bva11g01311 11 13434189 13439032 BWGD