Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01288 atggcaCCTTCCTTCCATCAAACTGCAAACACTGTCTGCGTAATGGATGCTTCAACCCAGCTGGGCTTTACTTTAGTTGAGCAACTTCTCCAAAGGGGTTACATCGTCCACGCCTCTGTTCAGCAACACGggGAAGAACAATTCAATGCTCTTTCTGCTGATTCCAATAGGCTCAAGATTTTCCCTTCAGACCCTTTTGATTACCATAGCATAATTGATGCGCTCAAAGACTGCTCTGGCTTGTTCTACACATTTGAGCCTCCTCGGGATCAACCCAACTATGATGAATATATGGCGGATGTAGAGGTGAGAGCTGCACACAACGTGCTCGAAGCATGTGCTCAAACAGAAACTATAGATAAAGTGGTCTTCTCGTCTTCGGCCACAGCTGTTATTTGGAGGGAGGATCGCAGGTCACTGGAATTGGACTTGGACGAGAGGCACTGGAGCGATGTAAATTTCTGCCGAAAATTCaagTTGTGGCACGGCATGTCTAAGACATTAGCGGAGAAAACAGCTTGGGCGCTGGCAATGGACAGAGGTGTAAATATGGTGTCAATTAACGCTGGCTTGTTGATGACTCGCGATTTGTCCATCACACACCCTCACTTGAGAGGGGCCGCCGAGATGTACGAAGATGGAGTGTTCGTCACCGTTGATCTTGACTTTTTGGTGGATGCCCACATTGGCGTCTACGAAGATATCTCATCGTACGGTCGCTATTTGTGCTTCAACAGAACCATCAACACCCACGACGACGCCGTTAAGCTCGCCCGCAAGTTAACCCCCTCCGCTCCTTCTTTGCCTCAAAGCTATGACCAgggtaaaaatttcatccaGCAAAGAATAAGCAACAAGAAGTTGAACAAGTTGATGGTGCATTTTACGAAATG 893 0.4614 MAPSFHQTANTVCVMDASTQLGFTLVEQLLQRGYIVHASVQQHGEEQFNALSADSNRLKIFPSDPFDYHSIIDALKDCSGLFYTFEPPRDQPNYDEYMADVEVRAAHNVLEACAQTETIDKVVFSSSATAVIWREDRRSLELDLDERHWSDVNFCRKFKLWHGMSKTLAEKTAWALAMDRGVNMVSINAGLLMTRDLSITHPHLRGAAEMYEDGVFVTVDLDFLVDAHIGVYEDISSYGRYLCFNRTINTHDDAVKLARKLTPSAPSLPQSYDQGKNFIQQRISNKKLNKLMVHFTK 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01288 297 Gene3D - 4 297 - -
Bva11g01288 297 Pfam NAD(P)H-binding 17 130 IPR016040 -
Bva11g01288 297 PANTHER CINNAMOYL-COA REDUCTASE-LIKE SNL6 4 296 - -
Bva11g01288 297 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 9 266 IPR036291 -
Bva11g01288 297 CDD FR_SDR_e 12 293 - -
Bva11g01288 297 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 4 296 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01288 Bva-Chr11 13323509 13325476 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01288 11 295 Monolignol Biosynthesis Gene Families AT5G58490 32.154 1.82e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01288 - - gmx:100793329 483.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01288 11 13323509 13325476 Bva11g01288 11 13323509 13325476 ECH