Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01286 ATGTCATATCTCCAAGTCCCTTCTCTACCACAGTCGCCCACACCACCGCTACCACTATCACCGCCGCCGCCAACGACTGCAGCAGAAACATCATCCCACCCCTCACCACTCCTTGTAGCTTTCACCCTCGTCATCCTCATCTGTTTCTTTATGGGTTTCTGTCTTATCTACTTCTGCAAGTGCTGCATCTCTGGCATCCTCCATGGTTGGGAATTTCAAGGAGGGGGCTCAGGTAGCCTTGTGGGTCGTTCTGGTGAGGAATCCCCCAACCGTGGCCTTGATGAATCTCTGTTGAAGAATTTCCCCACTTTCTCCTATTCCTCTGTTAAAGAATATCGCAAGGAGAAATATGGCCTAGAATGTGCCATTTGCTTAGTGGAGTTCGAGGAGGAGAGCTGGCTTCGATTAATAACCACTTGCTACCATGTTTTTCACAAAGAATGCATCGACCTCTGGCTTATGTCCCACAAGACATGCCCTGTTTGTCGCAGAGATCTAGATTCGCCGCCACAAAAGTACTCCCCCGACCATACCCACACGAGCAACAATGAATCATTTGCAGAGGAAGATGTGCGCATTGATGTCAAAGAAGGTGAAGATGCAAGTGATCATGGGGACAACAACGTAGGAGTTGAGAAACATGAACTAGTTTCACAACTCCCACAAAGGAGAGATCTGGAAAAGTTTTCGCGGTCACATTCCACAGGCCATTCAATAGTTCTTCTTAGAgaaggggaagaagaaaatggaggagGAGGCAGAGgacatgaagaagaagaagcagggGACAAATATACCTTGAGATTGCCGGATCACGTTAGGATCAAGTTAATAAGAGGGCATCAATATGCAAAAAGTTGTGTCACCTATGGAGAGTCGACAAAGCGTGGAGCTTGTGGTAATTGTGGTTTTGTTGAAGGGGTATCTGCAAGCAATTCACAAAGGGCTGTCGTTAAAGCAATTTA 965 0.4456 MSYLQVPSLPQSPTPPLPLSPPPPTTAAETSSHPSPLLVAFTLVILICFFMGFCLIYFCKCCISGILHGWEFQGGGSGSLVGRSGEESPNRGLDESLLKNFPTFSYSSVKEYRKEKYGLECAICLVEFEEESWLRLITTCYHVFHKECIDLWLMSHKTCPVCRRDLDSPPQKYSPDHTHTSNNESFAEEDVRIDVKEGEDASDHGDNNVGVEKHELVSQLPQRRDLEKFSRSHSTGHSIVLLREGEEENGGGGRGHEEEEAGDKYTLRLPDHVRIKLIRGHQYAKSCVTYGESTKRGACGNCGFVEGVSASNSQRAVVKAI 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01286 321 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 82 169 IPR013083 -
Bva11g01286 321 PANTHER RING-H2 FINGER PROTEIN ATL29 25 294 - -
Bva11g01286 321 MobiDBLite consensus disorder prediction 198 217 - -
Bva11g01286 321 CDD RING-H2_PA-TM-RING 120 163 - -
Bva11g01286 321 ProSiteProfiles Zinc finger RING-type profile. 121 163 IPR001841 -
Bva11g01286 321 MobiDBLite consensus disorder prediction 240 264 - -
Bva11g01286 321 MobiDBLite consensus disorder prediction 9 29 - -
Bva11g01286 321 SMART ring_2 121 162 IPR001841 -
Bva11g01286 321 MobiDBLite consensus disorder prediction 168 188 - -
Bva11g01286 321 MobiDBLite consensus disorder prediction 222 264 - -
Bva11g01286 321 Pfam Ring finger domain 120 163 IPR001841 -
Bva11g01286 321 PANTHER RING FINGER DOMAIN-CONTAINING 25 294 - -
Bva11g01286 321 SUPERFAMILY RING/U-box 98 175 - -
Bva11g01286 321 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01286 Bva-Chr11 13317387 13318352 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01286 20 297 Rapid Response to Elicitors AT3G05200 35.495 5.99e-38 137
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01286 - - gmx:100815505 256.914
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01149 08 5893629 5895129 Bva11g01286 11 13317387 13318352 BWGD