Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01284 ATGACTTTAGAAACTCTTCCATCTAATGAGTTTTTCAACTTCATTATCTATGAAACTATCTCTGCTACTCCATTTAGCAGCCATGAATCTTCAGAGCAAGAGGCTAGTTCCTTAATTGAGAACAGAGTAAAACATCAGGAACCTGATCCTGCGTCTAACATTTCTACTCGAAAACGCCAAGCTTTTGAGCCAGAAGCCATTGGGCGAAGCCAGAATTCTGCTGTGCAagggaggaagaagaggaaaaggaagcCAAAGATTTGTAAGAACAAGGAAGAGGCTGAGACGCAAAGAATGACCCACATTACTGTGGAAAGAAACCGCCGAAAGCAGATGAATGAGCATCTTGCTGTCCTGCGTTCACTCATGCCTGAATCCTACGTCCAAAGGGGTGACCAGGCCTCAATAGTAGGAGGTGCTATAGATTTTATGAAGGAGCTGGAGCACCGCTTGCAGTCACTTGAAGCTCAGAAGTTTCAGCTTCTACAGGGAAGAATGGCACTAATTCATGAGGATAAGTGCATGAAACCCccattttcacaattttttgtgTATCCTCAGTTCACATGGTCTCAGGTTCCTAACAAACATACAGCCAAGACCAAGGCTGCCATTGCTGATACTGAGGTTACTTTGATTGAGACTCATGCAAACCTTCGAATTATGTCGCGGAGAACCCCCAGACAGCTAACAAAATTGGTTGCTGGTTTTCAAGCATTATACCTCACCATTCTGCATCTCAACGTCACCGCCATGGGCCCATTTGTGCTCTATTCTGTCAATGCCAAGGTTGAAGAAGGATGCCAACTTGGTTCAGTTAATGACATTGCCACTGCAGTTCATCACTTGCTTAGTAGAATTGAGGAAGAAGCTTCCCTACTATGCTGTTG 890 0.4213 MTLETLPSNEFFNFIIYETISATPFSSHESSEQEASSLIENRVKHQEPDPASNISTRKRQAFEPEAIGRSQNSAVQGRKKRKRKPKICKNKEEAETQRMTHITVERNRRKQMNEHLAVLRSLMPESYVQRGDQASIVGGAIDFMKELEHRLQSLEAQKFQLLQGRMALIHEDKCMKPPFSQFFVYPQFTWSQVPNKHTAKTKAAIADTEVTLIETHANLRIMSRRTPRQLTKLVAGFQALYLTILHLNVTAMGPFVLYSVNAKVEEGCQLGSVNDIATAVHHLLSRIEEEASLLCC 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01284 296 MobiDBLite consensus disorder prediction 24 98 - -
Bva11g01284 296 Pfam Helix-loop-helix DNA-binding domain 97 148 IPR011598 GO:0046983
Bva11g01284 296 PANTHER TRANSCRIPTION FACTOR BHLH71 1 293 - -
Bva11g01284 296 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 96 147 IPR011598 GO:0046983
Bva11g01284 296 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 95 170 IPR036638 GO:0046983
Bva11g01284 296 SMART finulus 102 153 IPR011598 GO:0046983
Bva11g01284 296 Coils Coil 144 164 - -
Bva11g01284 296 CDD bHLH_AtFAMA_like 99 158 - -
Bva11g01284 296 Gene3D - 88 163 IPR036638 GO:0046983
Bva11g01284 296 PANTHER MAX DIMERIZATION, MAD 1 293 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01284 Bva-Chr11 13309310 13311123 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01284 88 264 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G72210 54.396 5.45e-59 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g01284 HLH 2.6e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01284 - - pvu:PHAVU_003G284500g 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01284 11 13309310 13311123 Bva11g01284 11 13309310 13311123 ECH