Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01282 ATGGCGACTTTAGAATCAGTTCTCAGTGTCTTTGCATCTTATCGGTGTTCCAccaagtccttttcatctccCAAACCACCAGACTCCATCAAGCTCTACCTCGAGAATTCTCATTTTACCATTTCCCGCAATTCCATCTTCTCTTCAACTCTTTCTTCAAGTAAATCCAGCAGAAGACTCTGCTTTGAATTATTGTGCTCTCCGTTGCAAGAGTTGGCGacagaagaaagaccagaGGAAACCCAGGAAACAAACGCCAAGAAGAAGCTTTACGTGTTTAATCTACCCTGGTCATTCTCGGTGGTGGACATCAAGAACCTCTTTGGCGAATGCGGATCTGTAACAGACGTCgagATAATAAAGAAGGAAGACGGAAAAAACAGAGCTTTTGCCTTCGTTACTATGGCTTCCGGGGAAGAGGCTGAGGCTGCCATTGAGAAATTTGACTCTCATGAAGTATCAGGCAGGAAGATACAGGTTGAGCTTGCCAAGAGGTTCAAGAAACTTTCTTCTCCACGTCCTCCTGGTGCCCCTGCTGATGAGACACGCCATAAAGTTTTTGCATCCAATCTTGCATGGAAAGTAAGATCTACCCATCTCAGAGACTTCATCACTGAACAATTCAAAAAACCAGCTTCAGCCAAGGTTGTATTTGAAAGCTCGACCGGCAGATCTGCTGGATATGGATTTGTTTCCTTTGTTACAAAGGAGGATGCAGAGGCGGCCGTTTCTAGTTTGAATGGGAAGGAATTAATGGGGCGACCAATCATCCTAAAATCAAGCCAGAAACCTGTTGAAGAAGCTGGAAgtaaaaaagaggaaaaagagcAAGGTGATGATGGTCAAGTGGAGGAATCCTA 860 0.4163 MATLESVLSVFASYRCSTKSFSSPKPPDSIKLYLENSHFTISRNSIFSSTLSSSKSSRRLCFELLCSPLQELATEERPEETQETNAKKKLYVFNLPWSFSVVDIKNLFGECGSVTDVEIIKKEDGKNRAFAFVTMASGEEAEAAIEKFDSHEVSGRKIQVELAKRFKKLSSPRPPGAPADETRHKVFASNLAWKVRSTHLRDFITEQFKKPASAKVVFESSTGRSAGYGFVSFVTKEDAEAAVSSLNGKELMGRPIILKSSQKPVEEAGSKKEEKEQGDDGQVEES 286
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01282 286 MobiDBLite consensus disorder prediction 255 286 - -
Bva11g01282 286 SUPERFAMILY RNA-binding domain, RBD 171 264 IPR035979 GO:0003676
Bva11g01282 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 184 263 IPR000504 GO:0003723
Bva11g01282 286 PANTHER OS02G0815200 PROTEIN 7 277 - -
Bva11g01282 286 SMART rrm1_1 89 161 IPR000504 GO:0003723
Bva11g01282 286 SMART rrm1_1 185 259 IPR000504 GO:0003723
Bva11g01282 286 SUPERFAMILY RNA-binding domain, RBD 85 174 IPR035979 GO:0003676
Bva11g01282 286 PANTHER CHLOROPLAST, PUTATIVE-RELATED 7 277 - -
Bva11g01282 286 Gene3D - 180 285 IPR012677 -
Bva11g01282 286 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 88 165 IPR000504 GO:0003723
Bva11g01282 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 90 158 IPR000504 GO:0003723
Bva11g01282 286 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 186 256 IPR000504 GO:0003723
Bva11g01282 286 MobiDBLite consensus disorder prediction 265 279 - -
Bva11g01282 286 Gene3D - 69 179 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01282 Bva-Chr11 13301145 13303818 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01282 90 262 Eukaryotic Initiation Factors Gene Family AT1G34140 32.973 4.67e-16 75.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01282 - - lang:109349094 310.457
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01282 11 13301145 13303818 Bva11g01282 11 13301145 13303818 ECH