Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01274 ATGGCGCCCGATAACTTTAACGACAAGAACGCTGTTTTCCGTAAACTAAAGGCCAAGGCAGAAAACAAGATGTGTTTCGATTGTAATGCAAAAAATCCAACCTGGGCGTCGGTCACTTATGGGATCTTCCTCTGCATCGATTGTTCAGCTGTTCACCGTAGTCTTGGTGTGCACATCAGCTTTGTGAGATCTACAAATTTAGACTCATGGACTCCTGAGCAACTAAAAATGATGAGCTTTGGAGGAAATAACCGTGCCCAAGTATTTTTCAAGCAACATGGTTGGACCGATGGTGGTGAAATAGAGGCTAAATATACATCTAGAGCTGCAGATTTGTATAGACAAATTCTTGCAAAGGAAGTAGCTAAGAGTATGGCAGAGGAGGGAGGTTTGCCAACTGTTGCTTCTCAGCCTGCACAAGCAGGTAATGGACTTCCTGAAGTCATAACCAATGAAGTACCAAAAGAGAACACTTTGGGGAAGCCAGAAACGCCTGAGAGCACTGTTTCACCAAAAGCTTCACATTCAGTACTTTCCAATACTGTCAAGAAGCCTATTGGTAGCAAAAAACCTGGGAAGACTGGTGGACTTGGTGCCCGAAAGCTTACCTCGAAGCCGAGTGAATCTCTCTATGATCAGAAGCCTCAAGAACCACCACCTGCTCCAGTTTCTTCCTCAACAAACAACAATCTGACTGCTGGGCCATCCTTCCCATCTCGATTTGAATATGTAGAAAATGTCCAATCATCTGAGTTGAATTCTGGTGGTGCACAAGTGATTAGCCATGTGACTCCTCCGAAGTCATCAAGCTTCTTTGCTGAATTTGGAATGGATAGTGGTTTTCCAAGGAAATACGCATCAAATTCCTCAAAAGTGCAAGTAGAGGAAACTGATGAAGCAAGAAAGAAGTTCGCCAATGCTAAATCTATTTCTTCAGCCCAATATTTTGGAGATCAGAACAAAGCTGCAGACGTAGAAGCTCAAGCTACTTTGTCGAAATTCTCAGGTTCAACTGCTATCTCCAGTGCTGATCTTTTTGGTCATTCATCTGATAACAACATTGATCTTTCCGCAAGTGACCTAATCAATCGACTCTCTTTCCAGgCACAACAGGACATCTCttccattaaaaatattgcaGGAGAGACGGGAAAGAAACTCAGCTACTTGGCCTCCACTTTGATAACGGATCTCCAAGACAGAATCCTCTA 1211 0.4286 MAPDNFNDKNAVFRKLKAKAENKMCFDCNAKNPTWASVTYGIFLCIDCSAVHRSLGVHISFVRSTNLDSWTPEQLKMMSFGGNNRAQVFFKQHGWTDGGEIEAKYTSRAADLYRQILAKEVAKSMAEEGGLPTVASQPAQAGNGLPEVITNEVPKENTLGKPETPESTVSPKASHSVLSNTVKKPIGSKKPGKTGGLGARKLTSKPSESLYDQKPQEPPPAPVSSSTNNNLTAGPSFPSRFEYVENVQSSELNSGGAQVISHVTPPKSSSFFAEFGMDSGFPRKYASNSSKVQVEETDEARKKFANAKSISSAQYFGDQNKAADVEAQATLSKFSGSTAISSADLFGHSSDNNIDLSASDLINRLSFQAQQDISSIKNIAGETGKKLSYLASTLITDLQDRIL 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01274 403 CDD ArfGap_ArfGap2_3_like 8 123 - -
Bva11g01274 403 SUPERFAMILY ArfGap/RecO-like zinc finger 11 125 IPR037278 -
Bva11g01274 403 Pfam Putative GTPase activating protein for Arf 12 97 IPR001164 GO:0005096
Bva11g01274 403 MobiDBLite consensus disorder prediction 133 237 - -
Bva11g01274 403 MobiDBLite consensus disorder prediction 161 183 - -
Bva11g01274 403 SMART arf_gap_3 10 126 IPR001164 GO:0005096
Bva11g01274 403 MobiDBLite consensus disorder prediction 223 237 - -
Bva11g01274 403 PRINTS HIV Rev interacting protein signature 62 83 IPR001164 GO:0005096
Bva11g01274 403 PRINTS HIV Rev interacting protein signature 22 41 IPR001164 GO:0005096
Bva11g01274 403 PRINTS HIV Rev interacting protein signature 41 58 IPR001164 GO:0005096
Bva11g01274 403 Gene3D Arf GTPase activating protein 2 140 IPR038508 -
Bva11g01274 403 ProSiteProfiles ARF GTPase-activating proteins domain profile. 10 128 IPR001164 GO:0005096
Bva11g01274 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE ACTIVATING PROTEIN 3, ISOFORM H-RELATED 1 403 - -
Bva11g01274 403 PANTHER ADP-RIBOSYLATION FACTOR GTPASE-ACTIVATING PROTEIN AGD9-RELATED 1 403 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01274 Bva-Chr11 13255131 13259338 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01274 13 91 C2H2 Transcription Factor Family AT3G07940 47.500 1.27e-19 86.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01274 K12493 K11855 gmx:100785169 666.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01162 08 5954796 5958979 Bva11g01274 11 13255131 13259338 BWGD
Bva11g01274 11 13255131 13259338 Bva11g01274 11 13255131 13259338 ECH