LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bva11g01246	ATGAAGAAGGTTGGTGAAACGAGGGAACATGTCTTCTTCCTCTGGTGGCTATTAACGACTCTTCATTTTCTGAGTGGTTGTTCTGAGAGTACAAGCTTACTTAGCACTGAAGCAAGATCTTCTCTACCTGGTGTGAAGCTGATTAAACAAAAACAGCAGCTGGTGGTTGACAACAGCGTGGTTCGTGTCAGTTTGTCAAAGGATGGCTTTGTCGTTGGTATATCATATAATGGAATTGACAATGTACTTCCTGCTCATCACGACTATATAGATAGAGGGTATTGGGACCTTGTTTGGAATGAACCAGGAGGTATAAGCAATTTTGAGagAATCACGGGGATAAAATTTTCGGTGGTATCAGAAAATGATGATCAGGTAGAGCTTTCATTCTTCAAAGAATGGACATTGTCCGTGACAGGCTCAAGTGTCCCAATGAACATAGACAAAAGGTATATATTTCGTAAAGGTGACTCAGGGTTTTATATGTATGGAATATTTGAGCGCACAGAAGGAATGCCAGCAGTGGAGGTTGATCAAATTAGGGTTGTTTTCAAGCTTCGAGAAGACAGGTTTCATTACATGGCTATATCAGACTCGAGGCAAAGAATCATGCCAAGCACGAAAGACAGATCAACTGGCCATTGCCAACCTCTTGCGTATCCTGAAGCTGTTCTCTTAACCAGTCCAAGTAACCCAGCACTCAAAGGAGAGGTGGATGACAAATACCAATACTCGTGTGAGAATAAAGATAACACTGTTCATGGCTGGATTTCTGATTCCCCTGCACCCGTTGGCTTCTGGATGATAACACCCAGTAATGAATTCCGAAATGGTGGACCAATCAAGCAAGATCTCACATCCCATGTTGGCCCCATCGCCCTCAACATGTTTGTTAGCACTCATTATGCTGGGAAGGAAGTAACAATGGCGTTCCAACAAGGGGAGACTTATAAAAAGGTTTTCGGCCCTGTTTTTGTCTACCTTAACTCTGCTCTTCCTAACAGCCAGGACTCTGTTTCAAAAGAGCTCTGGACAGATGCTAAGAATCAGATGTCTAAGGAAGTCCAAAGGTGGCCCTACGATTTCCCTCAGACACGAGATTACTTTCCACCCAATGAACGGGGAACAATCTCTGGACAATTACTAGTCCAAGACAGGTACATCAAAAGAATAAGATATCAATATGCTGACTCTGCTTATGTTGGTCTTGCTCTCCCAGGAGAAGCAGGGTCATGGCAAAGAGAAAGCAagGGTTACCAATTCTGGACCCAAGCAGACAATAAAGGCTACttcacaataaaaaatgttgtgCCAGGGGACTACAATCTATATGCCTGGGTTCCTGGCATAATAGGCGATTATAGATATAATGCTACCATTACCATAACACCAGGAGGTTTCATCAAATTGGGTTCACTTACATATATTCCTCCAAGAAATGGCCCTACCATTTGGGAAATTGGCATCCCTGACCGTTCAGCAGCAGAGTTCTACGTACCAGACCCTTACCCTACGCTCATCAACAGATTATATAGAGCAAATTCCAAAGAGAGGTTCAGACAATATGGCCTGTGGGAACGTTATGCTGATTTATATAAGAAGAATGACCTGGTTTACAATGTGGGTGTTAGCGATTATAGTAAAGATTGGTTCTTTGAGCATGTTCCAAGGAAGATAGGATATAATACGTACAATCCAACAACATGGCAGattgcttttcattttccaaaGGTTGCAAGGAGTGGAAATTATACACTTCGAATAGCCTTGGCATCAGCCGTAGATTCTGAACTGCAGGTTCGCGTCAATGATCCAAAATCTATTCAACCTGAGTTTACAACAGGTGAGATAGGCGGGGACAGCGCCATAGCGAGGCATGGCGTTCATGGATTGCATTGGTTGTTCAACATAGATGTACCAAGCGATCGATTTTTCAAAGGAAAGAACAGCATCTATCTAACACCGACAAAAGCCAGAACTCCTTTCCTAGGAGTTATGTATGACTATATCCGCTTAGAAAAACCTCCATCTCCAAGGACATTATA	2045	0.421	MKKVGETREHVFFLWWLLTTLHFLSGCSESTSLLSTEARSSLPGVKLIKQKQQLVVDNSVVRVSLSKDGFVVGISYNGIDNVLPAHHDYIDRGYWDLVWNEPGGISNFERITGIKFSVVSENDDQVELSFFKEWTLSVTGSSVPMNIDKRYIFRKGDSGFYMYGIFERTEGMPAVEVDQIRVVFKLREDRFHYMAISDSRQRIMPSTKDRSTGHCQPLAYPEAVLLTSPSNPALKGEVDDKYQYSCENKDNTVHGWISDSPAPVGFWMITPSNEFRNGGPIKQDLTSHVGPIALNMFVSTHYAGKEVTMAFQQGETYKKVFGPVFVYLNSALPNSQDSVSKELWTDAKNQMSKEVQRWPYDFPQTRDYFPPNERGTISGQLLVQDRYIKRIRYQYADSAYVGLALPGEAGSWQRESKGYQFWTQADNKGYFTIKNVVPGDYNLYAWVPGIIGDYRYNATITITPGGFIKLGSLTYIPPRNGPTIWEIGIPDRSAAEFYVPDPYPTLINRLYRANSKERFRQYGLWERYADLYKKNDLVYNVGVSDYSKDWFFEHVPRKIGYNTYNPTTWQIAFHFPKVARSGNYTLRIALASAVDSELQVRVNDPKSIQPEFTTGEIGGDSAIARHGVHGLHWLFNIDVPSDRFFKGKNSIYLTPTKARTPFLGVMYDYIRLEKPPSPRTL	681

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Annotation information

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Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bva11g01246	681	ProSiteProfiles	Prokaryotic membrane lipoprotein lipid attachment site profile.	1	27	-	-
	Bva11g01246	681	CDD	RGL4_M	373	473	IPR029413	-
	Bva11g01246	681	SUPERFAMILY	Galactose mutarotase-like	53	330	IPR011013	GO:0003824\|GO:0005975\|GO:0030246
	Bva11g01246	681	PANTHER	RHAMNOGALACTURONATE LYASE FAMILY PROTEIN	48	677	-	-
	Bva11g01246	681	SUPERFAMILY	Galactose-binding domain-like	480	673	IPR008979	-
	Bva11g01246	681	Gene3D	-	370	469	-	-
	Bva11g01246	681	Gene3D	-	45	346	IPR014718	GO:0030246
	Bva11g01246	681	CDD	RGL4_N	45	331	-	-
	Bva11g01246	681	Pfam	Rhamnogalacturonate lyase family	45	238	IPR010325	-
	Bva11g01246	681	Pfam	Polysaccharide lyase family 4, domain III	483	672	IPR029411	-

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Bva11g01246	Bva-Chr11	13088238	13092735	Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bva11g01246	44	677	Polysaccharide Lyase	AT1G09910	55.433	0.0	736

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Bva11g01246	K18195		-	gmx:100776664	926.776

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