Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01244 ATGTcgaattttttaagagaagaagaaaaggacaaGGTGCATGCTTACGGTTTGGCTGCTAGAGACTCCTCAGGAATCCTCTCTCCCTTCCATTTCACTAGAAGGGCAAATGGTGACAATGATATCAGCGTGAAGATAATGTATTGTGGAATTTGCCACACTGATCTTCATTATCTTAAGAATGATTTTGGAGATACCATCTATCCTATTGTTCCCGGacatgaGATTGTGGGTGAAGTCATAAAGGTGGGTCGCAGTGTCACAAAATTCAGTGTTGGCGACATAGCTGGTGTTGGTGGCGTTGTTGGCTCGTGTGGTTCGTGTTCTGAGTGCAACGAGGGCTTTGAAATCTATTGCAGAAAAGTGAGTCTTACGTTTAGCTCGCGTTACCATGATGGATCAATCAACTATGGCGGATATTCTGACAAGCTAGTGGTTGATGAGCACTTTGCGGTCCTGATTCCCAAAACTCTGCCACTAGATCGTGTAGCTCCATTACTCTGTGCTGGAATTACAGTTTACAGCCCAATGAAGTATTTTAAACTTGACCAACCTGGTCTGCATCTGGGTGTGGTAGGCCTTGGCGGCCTTGGCCATGTGGCTGTCAAGTTTGCCAAAGCTTTCAATATCAAAGTCACTGTTATAAGCACTTCTCCTAGTAAGAAGAAGGAAGCTTTGGAACGCCTTGGAGCAGACGCATTCTTGGTTAGCCGTGACCAACAACAATTGCagGATGCCATGGGAACATTGGACGGCATCATTGACACGGTTTCAGCCCACCATGCTCTGCAGCCATTGATTGATTTACTGAAAACAAGTGGAAAACTGGTTTTGGTGGGTGCACCAGTGTTACCTCTTGAGTTTCAAGCTCTGCCTTTTATTTTGGGAAGGAAGATAATCGCTGGCAGCGCAGCAGGAGGGAGTGAAGAGATGCAAGAGATGGTGGATTTTGCAGCAAAACATAATGTGACAGCGGATGTGGAGCTTATGCCAATGGACTACATAAGCACTGCTTTAGAGCGATTAGCAAATAACGATGTTAAGTACCGCTTTGTTATTGACGTGGCCAatacaataaacaaaatatccaATTA 1094 0.4305 MSNFLREEEKDKVHAYGLAARDSSGILSPFHFTRRANGDNDISVKIMYCGICHTDLHYLKNDFGDTIYPIVPGHEIVGEVIKVGRSVTKFSVGDIAGVGGVVGSCGSCSECNEGFEIYCRKVSLTFSSRYHDGSINYGGYSDKLVVDEHFAVLIPKTLPLDRVAPLLCAGITVYSPMKYFKLDQPGLHLGVVGLGGLGHVAVKFAKAFNIKVTVISTSPSKKKEALERLGADAFLVSRDQQQLQDAMGTLDGIIDTVSAHHALQPLIDLLKTSGKLVLVGAPVLPLEFQALPFILGRKIIAGSAAGGSEEMQEMVDFAAKHNVTADVELMPMDYISTALERLANNDVKYRFVIDVANTINKISN 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01244 364 Pfam Zinc-binding dehydrogenase 196 319 IPR013149 -
Bva11g01244 364 Pfam Alcohol dehydrogenase GroES-like domain 40 152 IPR013154 -
Bva11g01244 364 Gene3D - 19 355 - -
Bva11g01244 364 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 2 362 - -
Bva11g01244 364 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 323 IPR036291 -
Bva11g01244 364 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 73 87 IPR002328 GO:0008270|GO:0016491
Bva11g01244 364 Gene3D - 169 325 - -
Bva11g01244 364 SUPERFAMILY GroES-like 23 186 IPR011032 -
Bva11g01244 364 PANTHER ALDEHYDE REDUCTASE 2 362 - -
Bva11g01244 364 SMART PKS_ER_names_mod 25 353 IPR020843 GO:0016491
Bva11g01244 364 CDD CAD1 17 354 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01244 Bva-Chr11 13078031 13079856 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01244 14 364 Monolignol Biosynthesis Gene Families AT4G37990 62.393 3.59e-150 426
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01244 - - gmx:100801089 521.931
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01192 08 6172595 6175308 Bva11g01244 11 13078031 13079856 BWGD