Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01243 ATGTCGACCGCTGTGGCagcagaagaagagaagaaacctGTACCTGCCTATGGGTGGGCTGCCAGAGATTCCTCAGGAGTCCTCTCCCCTTTCCACTTTTCCAGAAGGGAAAACGGTGATAATGATATCACCGTGAGGATACTCTACTGTGGAATTTGTCACACCGATCTTCATTTACTCAAGAATAAATTTGGCATCAGTACTTATCCCATGGTTCCCGGGCATGAGATCGTGGGTGAAGTGATAAAGGTTGGTAGCAGCGTCACAAAATTTAGTGTTGGTGACAAAGCTGGTGTGACTGGTATTGTGGGTACTTGTGGCTCCTGTTCCAACTGCAACCAGGGCATGGAAACTTATTGCCCAAAACTGATTATAACCTTTGGTGGACATTACCATGTCGAATCAGTAAACTACGGTGGATACTCTGATAAGATGGTGGTGAACGACGCCATGAAATATTATGGACTTGATAAATCTGGGTTGCATTTGGGTGTGGTTGGTCTCGGTGGCCTTGGTCATGTGGCTGTCAAATTTGCCAAAGCGTTCAATATCAAAGTCACAGTTCTGAGCACTTCCATaggaaaaaggaaggaagCATTGGAACAGCTTGGCGCTGATGAATTTTTGCTGAGTAATGACCAAAAACAATTGCAGGATGCCATGAACACAATGGACGGCATCATTGACAGAATTTCAGCCCCCCATTCTTTGCATCCATTAGTTCGTCTGCTGAAGACAAatggaaaattgattttggtgGGTATCACAACCTCACCTCCTGACTTGCCATCTTTGGCTTTGATTACAGGGAGGAaaatgattggtgggagttcTGGGGGAGGAATGAGAGAGACCCAAGAGATGATTGATTTTGCAGCAAAGCACAATATAACTGCACAAGTGGAGGTTATTCCAATGGATTATGTGAACACTGCCTTGGGGCGACTTGCAAACAATGACGTTAAGTACCGAACAAATGGTGAGAAGGATGTCACCTTGAAGGTACTCTATTGTGGAATTGGCCACAGtgatattcatttttcaaagaatGAACTCGGGATGAGCATCTACCCCTTAGTTCCAGGgCATGAGCTCGTGGGTGAAGTGAGAGAGGTGGGCAGCAGTGTTACAAAATTCAGTGTTGGTGATATAGCTGGCGTGGGTGCCCTTGTGGGCAGCTGTGGCTCCTGTTACAACTGTGACGAGGGCTTGGAAAATTATTGCCCAAAATCAATTTACACCCTCAGTTCACGTTACCACGACGGTTCAATAACCTACGGTGGATACTCTGATCATATTGTGGTGGAGGAGCACTTTGCAGTGTTCATTCCAAAAACTTTGCCACTAGATGGCACAGCCCCATTACTGAGTGCCGGAATCACAGTGTATAGTCCCATGAAGCTTCATGGACTTGACAAGCCAGGGCTGCATCTGGGTGTGGTAGGCCTGGGTGGACTTGGTCACATGGCTGTCAAATTTGCTAAGGCTTTCAACATGAAGGTCACCATCATGAGCACTTCTCCAACCAAGAAGGAGGAAGCATTGGAACGACTTTGCGCAGATGCCTTCTTGCTCAGCAACCAACAAGAAGAATTGCAggaTGCGAGAAGCACAATGGATGGAATAATTGACACAGTTTCAGCACCTCACTCTCTCTATCCACTTGTTGACTTACTAAAGACACGGGGAAAATTGATTATGGTGGGTGCAGCAACCTTTGCTCCTGAGTTACCTTATTTATCTCTATTGAGAGGTGGGAAGATAATTGGGAGCAGTTTAAGTGGAGGATTAAAAGAAACCCAAGAAATGATTGATTTTGCAGCAAAGCATAATGTTACTGCTGAAGTGGAGGTTATTCCCATGGATTATGTCAACACTGCCAACGAAAGAATTCTAAAAAATGATGTCAAGTACAGGTTCGTTATCGATGTGGCTAACACCCTGAAATCTCCAACTACTACTACAATTTG 1970 0.4315 MSTAVAAEEEKKPVPAYGWAARDSSGVLSPFHFSRRENGDNDITVRILYCGICHTDLHLLKNKFGISTYPMVPGHEIVGEVIKVGSSVTKFSVGDKAGVTGIVGTCGSCSNCNQGMETYCPKLIITFGGHYHVESVNYGGYSDKMVVNDAMKYYGLDKSGLHLGVVGLGGLGHVAVKFAKAFNIKVTVLSTSIGKRKEALEQLGADEFLLSNDQKQLQDAMNTMDGIIDRISAPHSLHPLVRLLKTNGKLILVGITTSPPDLPSLALITGRKMIGGSSGGGMRETQEMIDFAAKHNITAQVEVIPMDYVNTALGRLANNDVKYRTNGEKDVTLKVLYCGIGHSDIHFSKNELGMSIYPLVPGHELVGEVREVGSSVTKFSVGDIAGVGALVGSCGSCYNCDEGLENYCPKSIYTLSSRYHDGSITYGGYSDHIVVEEHFAVFIPKTLPLDGTAPLLSAGITVYSPMKLHGLDKPGLHLGVVGLGGLGHMAVKFAKAFNMKVTIMSTSPTKKEEALERLCADAFLLSNQQEELQDARSTMDGIIDTVSAPHSLYPLVDLLKTRGKLIMVGAATFAPELPYLSLLRGGKIIGSSLSGGLKETQEMIDFAAKHNVTAEVEVIPMDYVNTANERILKNDVKYRFVIDVANTLKSPTTTTI 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01243 656 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 158 297 IPR036291 -
Bva11g01243 656 Pfam Alcohol dehydrogenase GroES-like domain 329 441 IPR013154 -
Bva11g01243 656 Pfam Alcohol dehydrogenase GroES-like domain 41 150 IPR013154 -
Bva11g01243 656 PANTHER ALDEHYDE REDUCTASE 6 149 - -
Bva11g01243 656 PANTHER ALDEHYDE REDUCTASE 150 324 - -
Bva11g01243 656 PANTHER ALDEHYDE REDUCTASE 324 649 - -
Bva11g01243 656 SUPERFAMILY GroES-like 17 174 IPR011032 -
Bva11g01243 656 CDD CAD1 18 324 - -
Bva11g01243 656 Gene3D - 1 149 - -
Bva11g01243 656 Gene3D - 458 614 - -
Bva11g01243 656 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 6 149 - -
Bva11g01243 656 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 150 324 - -
Bva11g01243 656 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE-LIKE PROTEIN 324 649 - -
Bva11g01243 656 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 447 612 IPR036291 -
Bva11g01243 656 Pfam Zinc-binding dehydrogenase 170 293 IPR013149 -
Bva11g01243 656 Pfam Zinc-binding dehydrogenase 485 608 IPR013149 -
Bva11g01243 656 CDD CAD1 320 643 - -
Bva11g01243 656 SMART PKS_ER_names_mod 26 321 IPR020843 GO:0016491
Bva11g01243 656 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 362 376 IPR002328 GO:0008270|GO:0016491
Bva11g01243 656 SUPERFAMILY GroES-like 314 475 IPR011032 -
Bva11g01243 656 Gene3D - 150 299 - -
Bva11g01243 656 Gene3D - 325 644 - -
Bva11g01243 656 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 74 88 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01243 Bva-Chr11 13073356 13077870 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01243 314 649 Monolignol Biosynthesis Gene Families AT4G37990 64.286 1.68e-135 399
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01243 - K23232 pavi:110772154 813.913