Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01231 ATGAAGACAACCATATCCAGACAAGAGAAAGGAGAGGAAGAGGTGAGGGAAGACCCAGAAATGGAATCACCTTATAGTCACACAAGACATGTTTCGTGCGACGATGAAGGGTCTCCGAGAGGAGTATTGGAAATGACTATTTCGAGAGCAGATTCAGACCAAAGTGGGAGCAGCAGGTCGTCGTCGCCGGAAAATTTATCGGTGGTACCGAGACCATCACTTTTGCGAGATAATCTTATTGCTAATGCTGGGCCTCAATGGAAGTCTATGATTGACGTATTTAGGAAGAAGTCTGTACGAAAATTTTCAACGATTCCTTTTCTTACGATGAGCTATGACATTTCTAGGAAGAGCTTGAAGAAGAGAATAGCTCGACTTCGTAACGGTGTAGACGGTGCTCTTGATCTTTCCGGTGTTTCTTCGAAGCCCTCATGGAGGAACTTCGATTACGCCGAACTCGCAGCTGCCACCGACGATTTCAGTTCCGAGAACTTGATTGGAAAAGGTGGGCATGCTGAGGTTTACAGAGGAAAGTTAGCCGATGGTCATGTTGTAGCAGTAAAGAGGATAATGAAGGACGACAAAGACGAAGAGGACGTAGACGGTGATTTCTTATCAGAGCTTGGGATTGTCGCTCACATTAATCATCCAAATGCAGCACGCTTGATTGGTTTTAGCATCGATGGTGGTCTCTTCTTCGTCCTGCAATTCGCCCCACATGGCAGCCTCTCTTCTTTGCTTTTCGGTTCAGAGTGTATGGAATGGAGCCTAAGGTTCAAGGTAGCTCTTGGGGTGGCAGAAGGATTGCGGTATCTCCACCATGATTGCCCTAGAAGAATCATTCACAGAGACATCAAAGCCTCTAACATATTGCTCAACCAAAATCATGATGCCGAGATTTCGGATTTTGGACTCGCTAAGTGGTTGCCGGAGAAGTGGCCTCACCACGTTATTTTCCCGATAGAGGGGACAGTCGGGTATTTGGCTCCCGAGTATTTTATGCACGGAATTGTGGACGAGAAGACTGATGTATTCGCATTTGGGGTTTTGTTACTGGAGCTCATAACCAGTCGTCGTGCAGTTGATGATTCAAGCAGACAAAGTCTTGTGATGTGGGCAAAACCACTGCTGGACGAAAACAATATCAAGGAATTAGCAGACCCCAGATTAGGATATGCTCATGATCCCAATCAAATGAACCGTGCCATGGCGACGGCTTCATTGTGCGTCAACCACTTAGCCTCCAAGCGACCATACATGAATCAGGTTGTGCAGCTACTCAAGGGCGAAGCTAGACCTGCTGATCTGAAACAAAAATCACCGACATCGCGATCGACGTTGTTAGATGCCTGTGACCTGGAAGATTATACATGCTCCAATTATTTGGACGAGATAAATCGCCATATGCAGCTAGTGATGGAATG 1424 0.4635 MKTTISRQEKGEEEVREDPEMESPYSHTRHVSCDDEGSPRGVLEMTISRADSDQSGSSRSSSPENLSVVPRPSLLRDNLIANAGPQWKSMIDVFRKKSVRKFSTIPFLTMSYDISRKSLKKRIARLRNGVDGALDLSGVSSKPSWRNFDYAELAAATDDFSSENLIGKGGHAEVYRGKLADGHVVAVKRIMKDDKDEEDVDGDFLSELGIVAHINHPNAARLIGFSIDGGLFFVLQFAPHGSLSSLLFGSECMEWSLRFKVALGVAEGLRYLHHDCPRRIIHRDIKASNILLNQNHDAEISDFGLAKWLPEKWPHHVIFPIEGTVGYLAPEYFMHGIVDEKTDVFAFGVLLLELITSRRAVDDSSRQSLVMWAKPLLDENNIKELADPRLGYAHDPNQMNRAMATASLCVNHLASKRPYMNQVVQLLKGEARPADLKQKSPTSRSTLLDACDLEDYTCSNYLDEINRHMQLVME 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01231 474 ProSiteProfiles Protein kinase domain profile. 160 435 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01231 474 Pfam Protein kinase domain 161 425 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01231 474 ProSitePatterns Serine/Threonine protein kinases active-site signature. 280 292 IPR008271 GO:0004672|GO:0006468
Bva11g01231 474 MobiDBLite consensus disorder prediction 20 37 - -
Bva11g01231 474 MobiDBLite consensus disorder prediction 48 68 - -
Bva11g01231 474 PANTHER RECEPTOR-LIKE CYTOSOLIC SERINE/THREONINE-KINASE 34 474 - -
Bva11g01231 474 Gene3D Transferase(Phosphotransferase) domain 1 239 448 - -
Bva11g01231 474 SUPERFAMILY Protein kinase-like (PK-like) 143 441 IPR011009 -
Bva11g01231 474 PANTHER OS08G0249100 PROTEIN 34 474 - -
Bva11g01231 474 SMART serkin_6 160 457 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01231 474 MobiDBLite consensus disorder prediction 1 69 - -
Bva11g01231 474 ProSitePatterns Protein kinases ATP-binding region signature. 166 192 IPR017441 GO:0005524
Bva11g01231 474 Gene3D Phosphorylase Kinase; domain 1 136 236 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01231 Bva-Chr11 13007253 13009814 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01231 139 468 Trihelix Transcription Factor Family AT5G38560 40.000 4.31e-68 228
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bva11g01231 Pkinase 1.9e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01231 - - gmx:100794225 601.282
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01203 08 6234551 6241909 Bva11g01231 11 13007253 13009814 BWGD