Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01228 ATGGATgcccaaagagaaaaaatctaTGTTGCTGTTGGAAATGATTGGCAAGATGGATTTAAGACCTTAGGATGGGCTCTCAAAAATTGGAGTTCTGATTCTATTTCCATAGTCATTCTCCAATTTGATTCCAACATCTCCAAGGACTATGTTTATACCCCATTTGGAAAACTCCCAGCAAGATCAGTGAATGATGAGAAATTGGAAATTCTCAGAAAGTGTGAACAGcaagaaatcaaaaacaagCTATCCGAGTATATTGCTTTCTGTGAAAAGGTGCCAGCTGAAATACttgaagttgagaaatttgatgaACCTATCCAAAAGCGCATCACTGATTTGATCTTTGGTCTTGAGATAAACAAACTGGTCATGGGATTTTCGTCCATGAAGGGTTCCTGGAAATCAAAAGGTGTGATTAGTGGGCTGTTCTATATTCATCAACACAAGCCAGATTTCTGTGAATTGTTCATCATATGCAATGGGAAACAAGTTTTCCTCAGAGGGAGAAACGATGAGAAAATCATGGAGGATGACAAGGGAGTAATGGTAGCTAGAATGAGAGACAGGGTAACTTTCAGAGATTGGCTAGAGAAAATATTCACTGAGAAATTGGGTGACACCCCAGATGGGAATTCTCGTGGATCATCAAATCGATCACTGAATATGGAGTCGCCTGTTTCCCAGAACCAGTGGGAACTCCATCTCCAGGAAATTGAAAACTATTCCCAGGAactattttcttgtaatttggAGATAGATAGCTGTGGGCAAGAAAATGACGTTTTGCAGATTAGTCCAATTGAGCcggaacaaaaaaattctaacacGGATGCTGCAGAAAAAATTGAGGTTCTGAAAATTAAACTCAAGGAAGCACACGAGACCATTCAATTGAAGAGGAAAGAAGCAAAGGATAGTATGGAAAGACAAGCCAAAGCTGAATGGGCTATTTGTTTATGTAACAGTCGGATAGAAGAACttgaatctaaaataaaagatgaaataaatatcAGAGAAGagttaaagaagaaattggaatcaggaaaagaacataattatgaaattagaaGTGATGTTGAAGAGAAGAGGAGAAGGGTTCGGTCAGTGGCTGAGCTGCAAGCAGAGCTGTCAAACAAGCTTCAAATATCGTTGATGGCAAGGTTACAAGGCGAGGCCCGGTTAGAGAATGCATTGAAAGCGAGGAGTGAGATGGTTAAGGAAATAGAGGagttaagaaaacaaagagatgTGCTGAATAGAAGGATCGAGTTTTGTAAAGAAAAGGATGCGATAGGAATGGCTGCGAGGATGAGCGAGACAAGGGGTTGTAGTTTCAGAGAATACACAGAGGAGGAGCTCCGGTTGGCCACCGACCAATTTTCCGAGCGGTTGCGATTCAAGTCCGGCGGGGATTGGACCAATGTCTATAAAGGACGATTCAACCATTCCTCTGTTGCCATCAAGATGCTGACTAATTTTCATGCTTTGTCTCAAGAACAATTTCTAGCCAAGGTGAAGCTTCTCGGAGATGTCCGGCAGCCTCATCTGGTGGCCATGCTAGGATTCTGCTCCGAGCCCAAGTGCATAATTTACGAATATATGCATAACGGTAGCTTGCAGGACATTCTGTTTTCTCGAAGAAGAAACCGCGCCTTACGGTGGCATGACCGTATCCGAATACTAACCGAAGTTTGCTGGGGCCTGGGCTTTCTTTGCTCGAACCAGTCGAGGCCCATTATTCATTGCCACCTCGCACCTTCCAAAATCCTTCTGGACCGCAATCTTGTTTCGAAGATCACAGGTTTTGGGCTTTATGACTGCGAGCATGATTGCAGCGGGGGATCGGAGATTCGGGCCCTAGGGATCTTGATGGCCCAGCTTTTGACCGGGAGAAATTGGGCTGGGCTTGTTGAGGAGACAATGATTGTGGACACAGAAGCTCTGGCAAGGGTTCTAGATGAGAAGGCCGGTCAATGGCCGTTGGATTTGGCAAAAGAACTTGCGGGCTTGGCAATGAGGTGCATGTCTAGTGAGAGTGAGCCCGACACAGAATTGAACATTGGTATGGTGATAGAGGAGGTAAATAAGATTAGAAGAAAGGCTGATGACCTAGTGGCACAAGGAGGACGAAGGGGGATGATTGGTGAGGGTGTAGATAAAGAGGATTCCACAGACGTACCTAATCTTTTCCTTTGCCCCATACTTCAGGAAGTAATGAAGAATCCACATGTGGCAGCAGATGGATTTTCGTATGAATTGGGAGCAATAGAACAATGGCTGCATTCGGGACATGAGACATCACCAATGACAAACTTAAGGCTCAAGCACAGATTCCTTAGCCCAAATCACTCCCTTCGTTCGCTAATTGAGGACTggcaaagcaaaagaatgcaTAATCCTTA 2405 0.4087 MDAQREKIYVAVGNDWQDGFKTLGWALKNWSSDSISIVILQFDSNISKDYVYTPFGKLPARSVNDEKLEILRKCEQQEIKNKLSEYIAFCEKVPAEILEVEKFDEPIQKRITDLIFGLEINKLVMGFSSMKGSWKSKGVISGLFYIHQHKPDFCELFIICNGKQVFLRGRNDEKIMEDDKGVMVARMRDRVTFRDWLEKIFTEKLGDTPDGNSRGSSNRSLNMESPVSQNQWELHLQEIENYSQELFSCNLEIDSCGQENDVLQISPIEPEQKNSNTDAAEKIEVLKIKLKEAHETIQLKRKEAKDSMERQAKAEWAICLCNSRIEELESKIKDEINIREELKKKLESGKEHNYEIRSDVEEKRRRVRSVAELQAELSNKLQISLMARLQGEARLENALKARSEMVKEIEELRKQRDVLNRRIEFCKEKDAIGMAARMSETRGCSFREYTEEELRLATDQFSERLRFKSGGDWTNVYKGRFNHSSVAIKMLTNFHALSQEQFLAKVKLLGDVRQPHLVAMLGFCSEPKCIIYEYMHNGSLQDILFSRRRNRALRWHDRIRILTEVCWGLGFLCSNQSRPIIHCHLAPSKILLDRNLVSKITGFGLYDCEHDCSGGSEIRALGILMAQLLTGRNWAGLVEETMIVDTEALARVLDEKAGQWPLDLAKELAGLAMRCMSSESEPDTELNIGMVIEEVNKIRRKADDLVAQGGRRGMIGEGVDKEDSTDVPNLFLCPILQEVMKNPHVAADGFSYELGAIEQWLHSGHETSPMTNLRLKHRFLSPNHSLRSLIEDWQSKRMHNP 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01228 801 PANTHER U-BOX DOMAIN-CONTAINING PROTEIN 50-RELATED 4 796 - -
Bva11g01228 801 SUPERFAMILY Protein kinase-like (PK-like) 445 678 IPR011009 -
Bva11g01228 801 SUPERFAMILY RING/U-box 721 796 - -
Bva11g01228 801 SMART Ubox_2 730 793 IPR003613 GO:0004842|GO:0016567
Bva11g01228 801 Pfam U-box domain 727 796 IPR003613 GO:0004842|GO:0016567
Bva11g01228 801 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 725 800 IPR013083 -
Bva11g01228 801 Gene3D Phosphorylase Kinase; domain 1 435 534 - -
Bva11g01228 801 PANTHER OS02G0152300 PROTEIN 4 796 - -
Bva11g01228 801 CDD RING-Ubox_WDSUB1_like 731 772 - -
Bva11g01228 801 Coils Coil 395 429 - -
Bva11g01228 801 Gene3D Transferase(Phosphotransferase) domain 1 535 617 - -
Bva11g01228 801 ProSiteProfiles U-box domain profile. 726 800 IPR003613 GO:0004842|GO:0016567
Bva11g01228 801 Coils Coil 325 345 - -
Bva11g01228 801 ProSiteProfiles Protein kinase domain profile. 462 715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01228 801 Coils Coil 276 303 - -
Bva11g01228 801 Pfam Protein tyrosine and serine/threonine kinase 471 607 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01228 Bva-Chr11 12991363 12995276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01228 3 797 U-box Gene Family AT5G65500 48.225 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Bva11g01228 PK_Tyr_Ser-Thr 9e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01228 - - gmx:100786771 1085.48