Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01208 ATGGAATTTGAAGATCAAGAAGAACAAGAGGAAGAGATGGGCATTGTGGGGGCGAGTTACGACTCGTTGGGGAACTCGTCCAGAGTGAAAATGCCGAACTCGGTAGTTGCCGAAGGAGGAGGAGAAGTGATGCTGGCACAGCCAACGAGGATTGGTAACAGCAAGGGCAGATACAGGGAGTGCTTGAAGAACCACGCGGTGAGTCTTGGCGGACACGCGCTTGATGGGTGCGGAGAGTTCATGGCAGCTGGAGCCGAAGGCACACTCAACGCTCTGAAATGCGCCGCCTGTAACTGTCACCGCAATTTCCACCGTAAAGAGACGGACACAATTGGCGGTGGAGTGGTGGGAGACCCGTATCTGTTGACCCATCACCCGCACCCGGCCCAGTTCGCAGCTTATTATCGAACGCCGTCTGGGTACTTGCACGTGGCGGGACAACAGAGGGGGACAGCGACGCTGGCGCTGCCGTCGACGTCGGGAGCAGGTGGTGGTGGGGGTGGGACCCAGAGTACTCGGGATGATCAAGAAGACGTTTCGAACCCAAGTGCAGGAGGGTCCAAGAAAAGGTTCAGGACAAAGTTCACGCAGGAACAGAAGGACAAAATGCTGGCTTTAGCTGAGAGATTGGGTTGGAGAATTCAGAAGCACGACGAGGCTGTGGTTCAGGAGTTCTGTAACGAAACAGGCCTGAAGCGTCACGTTCTTAAGGTTTGGATGCATAACAACAAGCACACTCTGGGTAAGAAGCCCTA 755 0.5497 MEFEDQEEQEEEMGIVGASYDSLGNSSRVKMPNSVVAEGGGEVMLAQPTRIGNSKGRYRECLKNHAVSLGGHALDGCGEFMAAGAEGTLNALKCAACNCHRNFHRKETDTIGGGVVGDPYLLTHHPHPAQFAAYYRTPSGYLHVAGQQRGTATLALPSTSGAGGGGGGTQSTRDDQEDVSNPSAGGSKKRFRTKFTQEQKDKMLALAERLGWRIQKHDEAVVQEFCNETGLKRHVLKVWMHNNKHTLGKKP 251
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01208 251 MobiDBLite consensus disorder prediction 154 187 - -
Bva11g01208 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 1 44 250 - -
Bva11g01208 251 Pfam ZF-HD protein dimerisation region 57 108 IPR006456 -
Bva11g01208 251 ProSiteProfiles Zinc-finger ZF-HD dimerization-type profile. 58 107 IPR006456 -
Bva11g01208 251 MobiDBLite consensus disorder prediction 154 190 - -
Bva11g01208 251 TIGRFAM homeo_ZF_HD: homeobox domain, ZF-HD class 188 244 IPR006455 -
Bva11g01208 251 Gene3D - 172 249 - -
Bva11g01208 251 SUPERFAMILY Homeodomain-like 180 249 IPR009057 -
Bva11g01208 251 TIGRFAM ZF_HD_prot_N: ZF-HD homeobox protein Cys/His-rich dimerization domain 57 107 IPR006456 -
Bva11g01208 251 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 44 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01208 Bva-Chr11 12890102 12891558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01208 1 247 ZF-HD Transcription Factor Family AT4G24660 50.602 6.28e-74 223
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF zf-HD Bva11g01208 ZF-HD_dimer 2.9e-29 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01208 - - gmx:100808910 325.865
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01228 08 6380491 6381926 Bva11g01208 11 12890102 12891558 BWGD