Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01177 ATGGCTTCCTTCAACCtctttcattctcttcttctttttctgccTCTTATGGGGACTTCCTCTGCTGTTGAGTTTCCCATTAAAGATGATCTGGAACCTTTTAATTGCTCTACAAAGATCAGCTCATGCAATGCTTCACTCTACCACAAAAACCAGAACCTCACAATGGACAAGATTGCCTCTTCTTACTCTGTCAATCTGTCCCAAATCAAGCCTATTGTAACACATGGTAGCAGAAGGGATTACCTGATAACTGTGCCTTGTTCTTGCAAAAATACCAGTGACCTTGACGGATATTTCTATGATACAGTCTACAACGTGCAGgcaaatgaaatttttcagaaaatcaAAGACACGGTTTACAGTGGACAAGCCTGGCCCCCTAAAGATTATAGTTTGAAACCTGGCCAGAACTTAACAATTCATCTTCCATGTGGGTGTTCAGAGACTGAGTCTCAAATTGTTGTGACCTACACAGTGCAGCAGAATGATACGCCGGCAGAGATTGCTGACCTGCTAAGTGCTAACCTGCTTAACATCATGAAAATGAACACATATCTGCTAGAAAATCcatcatatataaatgttGGTTGGGTGCTGTTTGTCCCCATGGAGTTAAATGGGCTTCCATCTTCCCCTATTGATGCATCTTCAGGAAAGAAACATCGTTGGGGAATCATCATTGGCATCTTGGCAAGTGTGACACTGCTTTCAGTCATTACAAtgttctttctcattctcagGAGAAATAGAGCCAATAAGATCAGCAAAGAAAACCCCAAATCCCTATCAAAAAATTCATCCCTCTATAGAACACACACTTTAAAGAGCTCCCACCTGCATACTGAAAACATGGAAGCCCCATTTGAATCAGAAGGACACAGAGTATTTAATCTTGAGGAGATTGAAGAGGccacaaataattttgacgaaactcgaagaATTGGAGGTGGTGGATACGGGACTGTATATTTTGGAACATTAGGGGATAAGGAAGTTGCCATAAAGATGATGAGGTCTAATAAATCCAAAGAGTTCTATGCTGAGCTCAAGGTCTTATATAAGATCCATCACATTAACATTGTGGAGCTGCTGGGTTATGCCAGTGGAGAGGACCATCTCTTTCTGGTTTATGAGTATGTTACAAATGGATCACTGAGCGATCATCTCCACAATCCATTGCTAAAAGGTTACCAGCCTCTTTCTTGGGCTGCTAGAGTGCAGATTGCGCTGGACGTGGCAAAAGGTCTTGAGTATATACATGATTACACAAAAGCTCGATATGTGCACCGTGATGTAAAGACAAGCAACATTCTTCTTGATGAGAAACTTAGAGCAAAGGTATCAGATTTTGGACTTGCAAAGCTTGTAGAACGAACCAACAACAATGATGATTTTATAGCAACAAAGCTTGTTGGAACACCAGGCTACCTTCCACCAGAGTCTGTGAAGGAGCTTCAGGTGACCCCAAAAACTGATGTATTTGCATTTGGAGTTGTTCTAGCAGAGCTGATTACAGGAAAACGCGCACTATTTCGTGACAGCAAAGAGGCCAGCAACATGAAACCACTTATTACAATTGTTAACAATATATTCCAAAATGATGACCCAGAAGTTGCTttggaaaatgaaatagatgAGAATCTTCGAGGaagctgtccaattgaggATGTCTTCAAGACAGCAGAAATAGCAGAATGGTGCATGAGTGAAGAAGCCATTAACAGGCCTGAGATGAGGGAGGTAGTAGTGACATTGTCCCAGCTTGTAATGTCCTCAACAGAGTGGGAAGCATCTCTTGGCGGAAACAACCCTGTATTGAatggaagatg 1832 0.3865 MASFNLFHSLLLFLPLMGTSSAVEFPIKDDLEPFNCSTKISSCNASLYHKNQNLTMDKIASSYSVNLSQIKPIVTHGSRRDYLITVPCSCKNTSDLDGYFYDTVYNVQANEIFQKIKDTVYSGQAWPPKDYSLKPGQNLTIHLPCGCSETESQIVVTYTVQQNDTPAEIADLLSANLLNIMKMNTYLLENPSYINVGWVLFVPMELNGLPSSPIDASSGKKHRWGIIIGILASVTLLSVITMFFLILRRNRANKISKENPKSLSKNSSLYRTHTLKSSHLHTENMEAPFESEGHRVFNLEEIEEATNNFDETRRIGGGGYGTVYFGTLGDKEVAIKMMRSNKSKEFYAELKVLYKIHHINIVELLGYASGEDHLFLVYEYVTNGSLSDHLHNPLLKGYQPLSWAARVQIALDVAKGLEYIHDYTKARYVHRDVKTSNILLDEKLRAKVSDFGLAKLVERTNNNDDFIATKLVGTPGYLPPESVKELQVTPKTDVFAFGVVLAELITGKRALFRDSKEASNMKPLITIVNNIFQNDDPEVALENEIDENLRGSCPIEDVFKTAEIAEWCMSEEAINRPEMREVVVTLSQLVMSSTEWEASLGGNNPVLNGR 610
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01177 610 ProSitePatterns Protein kinases ATP-binding region signature. 315 336 IPR017441 GO:0005524
Bva11g01177 610 Gene3D LysM domain 146 207 IPR036779 -
Bva11g01177 610 SUPERFAMILY LysM domain 156 203 IPR036779 -
Bva11g01177 610 SMART serkin_6 309 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01177 610 Gene3D Transferase(Phosphotransferase) domain 1 381 600 - -
Bva11g01177 610 PANTHER LYSM-DOMAIN PROTEIN KINASE FAMILY PROTEIN-RELATED 28 609 - -
Bva11g01177 610 ProSitePatterns Serine/Threonine protein kinases active-site signature. 428 440 IPR008271 GO:0004672|GO:0006468
Bva11g01177 610 ProSiteProfiles LysM domain profile. 156 202 IPR018392 -
Bva11g01177 610 SUPERFAMILY Protein kinase-like (PK-like) 288 586 IPR011009 -
Bva11g01177 610 ProSiteProfiles Protein kinase domain profile. 309 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01177 610 Pfam LysM domain 158 203 IPR018392 -
Bva11g01177 610 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 28 609 IPR044812 GO:0019199|GO:0045087
Bva11g01177 610 Gene3D Phosphorylase Kinase; domain 1 280 380 - -
Bva11g01177 610 Pfam Protein kinase domain 310 582 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01177 Bva-Chr11 12740374 12743274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01177 289 609 Receptor kinase-like Gene Family AT1G51940 50.153 1.17e-103 326
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Bva11g01177 Pkinase 2.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01177 - - gmx:100791718 761.911