Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01166 ATGAAAACGAGTGGTTCAAGATTCTGGCTACTGGGTGTGCTGGTTCTGGTGTTGCTAGAGGTTTCTTCTGCGTCACTTTCTCCTTCTGGAATAAACTATGAAGTTGTAGCTCTGATGGCCATTAAAACTGCCCTGGTTGATCCACACAATGTCCTGGAGAATTGGGATATTAATTCTGTCGATCCTTGTAGCTGGAGGATGGTCACTTGTTCGACAGATGGCTCTGTTTCTGCTTTGGGATTGCCTAGTCAGAATTTGTCCGGGACACTATCTCCTGGGATTGGAAACTTAACTAACTTGCAATCTGTGTTGCTGCAGAACAATGCCATTTCTGGTCAAATTCCTTCTGCTATTGGAAAGCTGGAAAAGCTTCAGACGCTTGATCTCTCCAATAATGCATTCACTGGAGAGATACCCAGTTCTTTGGGAGGTCTCAGGAACCTGAATTATTTGCGGTTGAATAATAACAGCCTTCAAGGAGCATGCCCTGAGTCTCTTGACAACATTGAAGGTCTAACCTTTGTGGACCTTTCTTACAACAATCTGAGCGGTTCCTTTCCAAGAGTATCAGCAAGAACTTTCAAGATTGTGGGTAATCCTTTAATTTGTGGTCCAAAGGCTAATAACTGCTCCACTGTTTTGCCGGAGCCACTTTCCTTCACACCAGATGTTTTAAGAGCCCAATCAGACTCTGGCACGAAAAGCCATCGTGTGGCAGTTGCTTTTGGTGCAAGTTTCGGTGCTGCTTTTATTGTCGTGATTATTGTTGGCTTTCTTGTTTGGTGGCGATACAGACACAACAAACAGATATTCTTTGATGTTAATGAACAATATGACCCAGAGGTTCGCCTTGGCCATTTAAGAAGGTACACATTCAAGGATCTCCGAGCTGCTACAGATCATTTCAGTTCGAAGAATATTCTTGGGAGGGGAGGTTTTGGAATAGTCTACAAGGGTTGCTTGAATGATGGGTCTGTCGTGGCAGTTAAAAGGTTGAAAGACTATAATGCTGGTGGGGGTGAAATTCAATTTCAGACAGAAGTTGAGACAATAAGTTTGGCTGTTCATCGGAATCTTCTTAGGCTTTGTGGGTTTTGCAGTACTCAGAATGAAAGGCTCCTTGTTTATCCATATATGTCCAATGGAAGTGTAGCCTCTAGATTAAAAGATCATATTCATGGTCGGCCAGCTTTAGATTGGGCAAGGCGGAAAAAAATAGCATTAGGTACGGCAAGAGGGTTGGTTTATTTGCACGAGCAATGTGACCCTAAAATTATTCACCGTGATGTCAAAGCAGCCAACATTTTATTGGACGAAGACTTTGAAGCAGTTGTTGGGGATTTTGGTTTGGCAAAGCTACTGGATCATAGAGATTCTCATGTGACCACAGCTGTGCGTGGCACTGTTGGTCACATTGCTCCTGAATACTTATCTACCGGTCAGTCATCAGAAAAGACTGATGTTTTTGGGTTTGGAATCTTGCTGCTTGAGCTAATCACAGGTCATAAGGCTTTGGATTTTGGACGAGCAACAAACCAGAAAATTGTACTGCTTGATTGGGTTAAGAAGCTGCATCAGGAAGGAAGACTAAGTCAGATGGTGGATAAAGATTTGAAGGGAAAATTTGACCCAGTTGAATTGGAAGAAATGGTTCAGGTTGCACTGTTATGCACACAGTTCAATCCTTCCCACCGTCCAAAGATGTCTGAGGCATTAAAGATGTTGGAAGGCGATGGGTTAGCTGAGAGATGGGAGGCCTCACAGAAGATTGAGACGCCAAGGTTCCGGTCCTGTGAGAACCCTCCACAAAGATATTCAGATTTTATGGGAGACTCACTAATAATAGAAGCTATGGAGCTTTCTGGCCCCAGGTG 1874 0.4354 MKTSGSRFWLLGVLVLVLLEVSSASLSPSGINYEVVALMAIKTALVDPHNVLENWDINSVDPCSWRMVTCSTDGSVSALGLPSQNLSGTLSPGIGNLTNLQSVLLQNNAISGQIPSAIGKLEKLQTLDLSNNAFTGEIPSSLGGLRNLNYLRLNNNSLQGACPESLDNIEGLTFVDLSYNNLSGSFPRVSARTFKIVGNPLICGPKANNCSTVLPEPLSFTPDVLRAQSDSGTKSHRVAVAFGASFGAAFIVVIIVGFLVWWRYRHNKQIFFDVNEQYDPEVRLGHLRRYTFKDLRAATDHFSSKNILGRGGFGIVYKGCLNDGSVVAVKRLKDYNAGGGEIQFQTEVETISLAVHRNLLRLCGFCSTQNERLLVYPYMSNGSVASRLKDHIHGRPALDWARRKKIALGTARGLVYLHEQCDPKIIHRDVKAANILLDEDFEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELITGHKALDFGRATNQKIVLLDWVKKLHQEGRLSQMVDKDLKGKFDPVELEEMVQVALLCTQFNPSHRPKMSEALKMLEGDGLAERWEASQKIETPRFRSCENPPQRYSDFMGDSLIIEAMELSGPR 624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01166 624 SMART serkin_6 302 575 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01166 624 Pfam Protein kinase domain 303 573 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01166 624 SUPERFAMILY Protein kinase-like (PK-like) 286 582 IPR011009 -
Bva11g01166 624 Pfam Leucine rich repeat 98 158 IPR001611 GO:0005515
Bva11g01166 624 Pfam Leucine rich repeat N-terminal domain 32 71 IPR013210 -
Bva11g01166 624 Gene3D Ribonuclease Inhibitor 31 212 IPR032675 -
Bva11g01166 624 ProSiteProfiles Protein kinase domain profile. 302 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01166 624 Gene3D Transferase(Phosphotransferase) domain 1 379 594 - -
Bva11g01166 624 Gene3D Phosphorylase Kinase; domain 1 271 378 - -
Bva11g01166 624 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 624 - -
Bva11g01166 624 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Bva11g01166 624 ProSitePatterns Protein kinases ATP-binding region signature. 308 330 IPR017441 GO:0005524
Bva11g01166 624 SUPERFAMILY L domain-like 32 193 - -
Bva11g01166 624 PANTHER PROTEIN NSP-INTERACTING KINASE 3 6 624 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01166 Bva-Chr11 12656038 12661147 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01166 67 624 Receptor kinase-like Gene Family AT1G60800 76.357 0.0 818
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bva11g01166 Pkinase 6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01166 - - gmx:100806943 1084.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01166 11 12656038 12661147 Bva11g01166 11 12656038 12661147 ECH