Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01158 ATGTCTACACTGAACCATCTCTTTGATCTTCCAGAGCAGATATGCTATGTAAAATGTGGATTCTGCACCACCATATTAATGGTTAGTGTTCCATGCAGCAGTTTATCTATGGTAGTGACAGTGAGATGTGGGCACTGCACTAGCCTCCTTTCTGTTAGTATGATGAAAGCTTCTTTTGTCCCTTTCCATCTCTTAGCTTCCCTCAGTACTCATCTTGAGCCAAAAGAACGCAGTCCAGAAGATGCGAACAAGACTTCAGAAAGCCAAAATGCAACCATGGTGACCAATTCTGATTGTGAGGAAGAGGAAATAATTCCGATGATTAACATTGTTAACAAACCCCCAGAGAAGAGACAGCGAACACCTTCAGCTTATAACCGCTTCATCAAAGAAGAAATCAGAAGGCTAAAGGCAGAAGATCCTGACATGGCACACAAGGAAGCATTCAGCACAGCTGCAAAAAATTGGGCCAATTTCCCCCCAGCTCACTGTAAAGTGGATGAGGAGAGTTGTAGCCAGACAGAACAACTTGCGGATCTGGATTCTCTCGTGAACTATCATGATGTTGATAAGGTAAATGAAGAAGGTCCAGATTTTCGTGGAAGAAAGGTCCCAAGGTATTCCATTTTGGGAAGGAAACCAACCGTTTG 650 0.4323 MSTLNHLFDLPEQICYVKCGFCTTILMVSVPCSSLSMVVTVRCGHCTSLLSVSMMKASFVPFHLLASLSTHLEPKERSPEDANKTSESQNATMVTNSDCEEEEIIPMINIVNKPPEKRQRTPSAYNRFIKEEIRRLKAEDPDMAHKEAFSTAAKNWANFPPAHCKVDEESCSQTEQLADLDSLVNYHDVDKVNEEGPDFRGRKVPRYSILGRKPTV 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01158 216 Gene3D High mobility group box domain 111 181 IPR036910 -
Bva11g01158 216 MobiDBLite consensus disorder prediction 73 96 - -
Bva11g01158 216 PANTHER PROTEIN YABBY 6-RELATED 1 177 IPR006780 GO:0007275
Bva11g01158 216 PANTHER AXIAL REGULATOR YABBY 4 1 177 - -
Bva11g01158 216 Pfam YABBY protein 11 165 IPR006780 GO:0007275
Bva11g01158 216 SUPERFAMILY HMG-box 110 161 IPR036910 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01158 Bva-Chr11 12620315 12622314 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01158 2 214 C2C2-YABBY Transcription Factor Family AT1G23420 56.195 1.67e-74 224
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-YABBY Bva11g01158 YABBY 4e-63 CL0114
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01158 K25796 - gmx:100806755 323.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01283 08 6713503 6715337 Bva11g01158 11 12620315 12622314 BWGD
Bva11g01158 11 12620315 12622314 Bva11g01158 11 12620315 12622314 ECH