Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01141 ATGGCTCAGGAAAGCCgagatagaaataaaatcttgAAGAAGTCACAAAAGGATTCTCCTCCTTCGAATGAGGACGCGCCTCCTCCAGAAGCATTGCCGCCGTCACCTGGTGGTGATTCCAAAGATAACCGGGATTCTCCACCAAAGTCTCCGCCTCCGCCAAAGGATTCACCCCCGCCTCCGCCAAAGGATCCACCACCGCATCCGCCAAAGTATTCACCACCGCCTCCGCCAAAGTATTCACCACCGCCTCCGCCAAAGGATTCACCACCGCCTCCGCCAAATGATCCACCATCGCCACCCCCAAATGATCCACCATCGCCGCCTCCAAAGGATCCACCATCGCCGCCGCCAAAAGATTCACCATCGCCGCCACCTAAAGCTTCACCATCACCACCACCATCTCCATCATCGCCGCCGCCGCCATTATCGCATGATAATGATTCTACAGCTCCTCCTCCCCCTAAACAGccacctccaccaccacccCCGCCTTCAAGTAAGAATTCTCCTCCTCCAGCTCAACCAACTCCACCTCCCCCACCTGATAATTCATCCGCTTCGGACAACGGAACATCTGACAgatcaccaccaccaccaccacagCGAACAAGCTTACCACCATCCTTTTTTGCCGCTGTAAATAGCAGTCCCCCACCACCGAAGACATTTAGCTCTCCACCACCAACGGTATTTAGTCCTCCTCCAAACTCTAAGTCAAATCGTCCTCCACCGCCGCACTCACCGGAGATTTCCCATGGTTCCCGCGGAAAGTCAAATCGTTCCACTAGTAACCCTTCAAATTCAAGTTCAGGAAAGGGCGGTGACAATATGGTAAAATACGTAGCTGCTACGCTAGCCGGAGCTTCCGTTATTGCCTTGGTTGTTATAATTGTCCTATTAGTCTGCATGTGGAGGAGAAGAAAACGAGTTGAAGTCTATGCCGCACCACTTTTTATGCCTGTCAATAACCTTCCTATGGCAAAAGGTGCAGATGGGCATTACTATGTACAACAGCATGGTGCTGGGAGTGCTTCACAAGATGGTATTTATAGATCAAATGGGTCTCAAAACCAGTTACACACTACTGATACAGGACCGAAGCCTGCTCAGATAGTTTTCAGCTATGAGAACATTGTGGAGATAACTAATGGTTTTTCTCGGCAAAACATACTTGGTGAGGGTGGATTTGGATGTGTATACAAGGCTTGGCTTCCTGATGGTAGAGTGGCTGCTGTAAAAAAGTTGAAAGCTGGCAGTGGCCAAGGGGAACGGGAGTTCAAGGCTGAAGTTGAGATAATCAATCGTGTACATCATAAACATCTCGTCTCCTTAGTTGGCTATTGCATAGAAAAGAAGCAACgaattttgatatatgagtTCGTCCCCAATAAAACCCTTAATCATCATTTGCATGGCAGTGAAATGACAGTTTTGGATTGGGCCGAAAGGCAGAAGATAGCAATAGGGGCAGCAAAGGGTTTGGCGTATCTGCATGAAGACTGCAGCCCAAGAATTATTCATAGGGATATCAAATCCGCAAACATCCTCTTAGATGATGCTTTTGAAGCCAAGGTTGCGGACTTTGGACTGGCCAAGTTGAGCGATGATGCCAACACTCATGTATCAACACGGGTAGTAGGAACCTTTGGGTACATGGCCCCAGAGTATGCAACAAGTGGAAAATTGACAGATAGGTCAGATGTTTTCTCCTTTGGAGTGGTGCTCCTGGAACTTGTTACCGGAAGGAAGCCAGTTGATCAGTCACAGCCTCTGGGGGAAGAGAGTTTAGTAGAATGGGCTCGTCCACTTCTCATTCATGCAGTTGAAACTCGTGATTTTGGTGCACTTGTGGATCCAAGGCTAGAAGGGCGTTTTGTGGAGAGTGAGATGTTCAGAATGATTGAAGCTGCCGCTGCTTGCATCCGTCATTCGGCTCCAAAAAGACCCCGCATGGTTCAGTTGGTTAGAGCCTTAGACAGTGGAGGTGAACTATTTGACCTCTCTAACGGGGTAAAATATGGTCAGAGCACTATTTATGATTCTGGCCAGTATAATGAGGACATCATGAAATTCAGGAGGATGAACAATGAAAGCAGTGTTAACTCTGATATTTACAGTGGAGATTACAGTTTTTCCAGAGAAATGTCTGGACAGCAACAAACGTGGGTCCCTGGTAATTCAAGAGGAGAGTCAGAGACTAGATCTCTGCATGGACATAGCGTAAGTACTGAGCATAAGAATACGAGGGAACGTAGATA 2261 0.4644 MAQESRDRNKILKKSQKDSPPSNEDAPPPEALPPSPGGDSKDNRDSPPKSPPPPKDSPPPPPKDPPPHPPKYSPPPPPKYSPPPPPKDSPPPPPNDPPSPPPNDPPSPPPKDPPSPPPKDSPSPPPKASPSPPPSPSSPPPPLSHDNDSTAPPPPKQPPPPPPPPSSKNSPPPAQPTPPPPPDNSSASDNGTSDRSPPPPPQRTSLPPSFFAAVNSSPPPPKTFSSPPPTVFSPPPNSKSNRPPPPHSPEISHGSRGKSNRSTSNPSNSSSGKGGDNMVKYVAATLAGASVIALVVIIVLLVCMWRRRKRVEVYAAPLFMPVNNLPMAKGADGHYYVQQHGAGSASQDGIYRSNGSQNQLHTTDTGPKPAQIVFSYENIVEITNGFSRQNILGEGGFGCVYKAWLPDGRVAAVKKLKAGSGQGEREFKAEVEIINRVHHKHLVSLVGYCIEKKQRILIYEFVPNKTLNHHLHGSEMTVLDWAERQKIAIGAAKGLAYLHEDCSPRIIHRDIKSANILLDDAFEAKVADFGLAKLSDDANTHVSTRVVGTFGYMAPEYATSGKLTDRSDVFSFGVVLLELVTGRKPVDQSQPLGEESLVEWARPLLIHAVETRDFGALVDPRLEGRFVESEMFRMIEAAAACIRHSAPKRPRMVQLVRALDSGGELFDLSNGVKYGQSTIYDSGQYNEDIMKFRRMNNESSVNSDIYSGDYSFSREMSGQQQTWVPGNSRGESETRSLHGHSVSTEHKNTRERR 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01141 753 ProSiteProfiles Protein kinase domain profile. 386 666 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01141 753 MobiDBLite consensus disorder prediction 220 250 - -
Bva11g01141 753 PRINTS Proline rich extensin signature 45 57 - -
Bva11g01141 753 PRINTS Proline rich extensin signature 20 36 - -
Bva11g01141 753 PRINTS Proline rich extensin signature 79 95 - -
Bva11g01141 753 PRINTS Proline rich extensin signature 58 79 - -
Bva11g01141 753 ProSitePatterns Protein kinases ATP-binding region signature. 392 415 IPR017441 GO:0005524
Bva11g01141 753 MobiDBLite consensus disorder prediction 733 753 - -
Bva11g01141 753 ProSitePatterns Serine/Threonine protein kinases active-site signature. 506 518 IPR008271 GO:0004672|GO:0006468
Bva11g01141 753 MobiDBLite consensus disorder prediction 1 20 - -
Bva11g01141 753 Gene3D Transferase(Phosphotransferase) domain 1 462 667 - -
Bva11g01141 753 CDD STKc_IRAK 392 660 - -
Bva11g01141 753 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 95 726 - -
Bva11g01141 753 SUPERFAMILY Protein kinase-like (PK-like) 369 659 IPR011009 -
Bva11g01141 753 MobiDBLite consensus disorder prediction 253 275 - -
Bva11g01141 753 MobiDBLite consensus disorder prediction 717 753 - -
Bva11g01141 753 Pfam Protein kinase domain 387 591 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01141 753 MobiDBLite consensus disorder prediction 717 732 - -
Bva11g01141 753 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK13-RELATED 95 726 - -
Bva11g01141 753 SMART serkin_6 386 659 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01141 753 MobiDBLite consensus disorder prediction 1 275 - -
Bva11g01141 753 Gene3D Phosphorylase Kinase; domain 1 348 461 - -
Bva11g01141 753 MobiDBLite consensus disorder prediction 50 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01141 Bva-Chr11 12546459 12551439 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01141 286 655 Trihelix Transcription Factor Family AT1G68690 60.800 1.04e-158 473
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Bva11g01141 Pkinase 6e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01141 - - lja:Lj2g3v1414850.1 622.854
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01141 11 12546459 12551439 Bva11g01141 11 12546459 12551439 ECH