Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01137 atgacgAAATCAGAGAACGAGTACAAGAAAGGGCTATGGACAGAAGAGGAAGACAAGATTTTGCTAGAATACATCAGGGTGCATGGAAGAAAGCACTGGAACCGCATTCCAAAACTAACATGCTTAAAGAGGAACGGGAAAAGCTGTAGATTAAGGTGGGTGAACTATCTGAGCCCAAACGTGAAACATGACAATTTtacagaggaagaagaagaccTCATCATTAGACTCCATAAACTCCTTGGAAACAGGTGGTCTCTCATAGCGGGTAGGGTACCAGGAAGAACTGACAACCAAGTGAAGAACCATTGGAACACTCACTTGTGCAGGAAACTTGGCCTCATaaagcaaacaagaaaacaaaggtTGCCCTCAAAATCAAATGATTCTGAGGTGAAAAGGATCCAAACAGCACCTTCGAGTTCAAATTGTGGAAACCTTTCTCCAATTAGTGATCACAAAGGAGCTGAAGTACAAGGGCAAGGAAGCTGTTTGGATGGTTTTGAGGAGTTCAATGTTGCACAATGGGAAGGAGAGAAGCACGTTGATCaatctttgttattttatgatgACCACAATTTTGTTGTAGATAGCCCTGAGTTGATGGAATTCTTTGATGGGTTTGACCCTGTCGATCCAATGTA 644 0.3851 MTKSENEYKKGLWTEEEDKILLEYIRVHGRKHWNRIPKLTCLKRNGKSCRLRWVNYLSPNVKHDNFTEEEEDLIIRLHKLLGNRWSLIAGRVPGRTDNQVKNHWNTHLCRKLGLIKQTRKQRLPSKSNDSEVKRIQTAPSSSNCGNLSPISDHKGAEVQGQGSCLDGFEEFNVAQWEGEKHVDQSLLFYDDHNFVVDSPELMEFFDGFDPVDPM 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01137 214 Gene3D - 64 138 - -
Bva11g01137 214 PANTHER TRANSCRIPTION FACTOR MYB114-LIKE 4 208 - -
Bva11g01137 214 CDD SANT 65 108 IPR001005 -
Bva11g01137 214 MobiDBLite consensus disorder prediction 130 147 - -
Bva11g01137 214 Pfam Myb-like DNA-binding domain 10 57 IPR001005 -
Bva11g01137 214 Pfam Myb-like DNA-binding domain 65 108 IPR001005 -
Bva11g01137 214 CDD SANT 13 57 IPR001005 -
Bva11g01137 214 Gene3D - 2 63 - -
Bva11g01137 214 ProSiteProfiles Myb-like domain profile. 58 108 IPR001005 -
Bva11g01137 214 MobiDBLite consensus disorder prediction 120 147 - -
Bva11g01137 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 58 112 IPR017930 -
Bva11g01137 214 SUPERFAMILY Homeodomain-like 8 104 IPR009057 -
Bva11g01137 214 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 57 IPR017930 -
Bva11g01137 214 ProSiteProfiles Myb-like domain profile. 5 57 IPR001005 -
Bva11g01137 214 SMART sant 62 110 IPR001005 -
Bva11g01137 214 SMART sant 9 59 IPR001005 -
Bva11g01137 214 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 4 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01137 Bva-Chr11 12524188 12526857 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01137 5 114 MYB Transcription Factor Family AT5G40330 80.000 2.28e-61 189
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g01137 Myb_DNA-binding 3.2e-13 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01137 K09422 - qsu:112028859 228.024
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01137 11 12524188 12526857 Bva11g01137 11 12524188 12526857 ECH