Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01136 ATGTCTGCCTCTGCCACACTCTCCTCCACAACTTCCCAGCTCAGAACCTTTCCCTCTCTACCTTCCACCACCACTGCCTCACCATGTTCTCTCAGATTTTCCCTCACTTTCCcggaaaatagaaaacaaatcaCACCCACAAGCACCTCTATTCAAAAACGGCAACTTTCAGCAAGGACACCCAGATTCTTGGTAAAATCCCAATCCACTGCCCCTGCTTCAGCCGATACTGTGAAGGTGACACCAATTCCTACTGAAATGAAGGCATGGGTTTATGGAGAATATGGGAGTGTAGATGTTTTGAAGTTCGACTCAAATGTTGCCGTGCCTGATGTTAAGGAAGATCAGGTCCTCATCAAGGTTGTGGCTGCGGCTCTTAACCCCGTTGATGGAAAGAGGAGGCAAGGAAAGTTCAAGGCCACTGATTCTCCTCTTCCGACTGTTCCAGGTTATGATGTTGCTGGTGTAGTGGCAAAGGTTGGCAGTCAAGTAAAAGACTTCAAAGTGGGTGATGAAGTATATGGGAATATCAATGAGAAAGCATTAGAAGGGCCTAAACAGTTTGGGTCTCTGGCTGAGTATACTGCTGTCGAAGAGAAATTGTTAGCACCAAAACCAAAGAATTTGGATTTTGCTCAGGCTGCTGGGCTTCCTCTTGCTGTTGAGACTGCTTATGAGGGTCTAGAGAGGACTGGATTCTCATCCGGTAAATCTATTCTGGTGCTGAATGGCTCTGGTGGAGTTGGAAGTTTAGTGATTCAGTTAGCTAAGCATGTATTCGGTGCTTCAAGTGTTGCGGCCACTTCAAGCACTAGAAATTTGGAGCTGTTGAAGAGTCTGGGTGCTGATTTGGCTATTGACTACACAAAGGAGAACTTTGAAGACTTGCCAGAAAAATTTGACGTGGTTTATGATGCCATAGGGCAATGCGAGAGGGCAGCGAAGGCAGTGAAAGAAGGTGGCAGTGTGGTAGCACTCACAGGTGCTGTTACACCACCCGGGTTCAGATTTGTGGTTACTTCGAATGGAGCTGTTTTGAGGAAACTGAACCCTTATTTCGAGAGTGGAAAGGTGAAGCCTGTTGTAGACCCGAAGGGTCCATTCCCCTTTGCGCAGGTTGTTGAAGCCTTCTCTTATCTGGAAACAAATCGAGCAACTGGAAAAGTTGTTGTACATCCCATCCCCTG 1187 0.4625 MSASATLSSTTSQLRTFPSLPSTTTASPCSLRFSLTFPENRKQITPTSTSIQKRQLSARTPRFLVKSQSTAPASADTVKVTPIPTEMKAWVYGEYGSVDVLKFDSNVAVPDVKEDQVLIKVVAAALNPVDGKRRQGKFKATDSPLPTVPGYDVAGVVAKVGSQVKDFKVGDEVYGNINEKALEGPKQFGSLAEYTAVEEKLLAPKPKNLDFAQAAGLPLAVETAYEGLERTGFSSGKSILVLNGSGGVGSLVIQLAKHVFGASSVAATSSTRNLELLKSLGADLAIDYTKENFEDLPEKFDVVYDAIGQCERAAKAVKEGGSVVALTGAVTPPGFRFVVTSNGAVLRKLNPYFESGKVKPVVDPKGPFPFAQVVEAFSYLETNRATGKVVVHPIP 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01136 395 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 51 395 IPR044626 GO:0016628
Bva11g01136 395 Gene3D - 228 342 - -
Bva11g01136 395 CDD MDR_like_2 87 391 - -
Bva11g01136 395 SMART PKS_ER_names_mod 96 391 IPR020843 GO:0016491
Bva11g01136 395 MobiDBLite consensus disorder prediction 1 26 - -
Bva11g01136 395 Pfam Alcohol dehydrogenase GroES-like domain 115 178 IPR013154 -
Bva11g01136 395 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 209 332 IPR036291 -
Bva11g01136 395 Gene3D - 94 391 - -
Bva11g01136 395 SUPERFAMILY GroES-like 83 241 IPR011032 -
Bva11g01136 395 Pfam Zinc-binding dehydrogenase 280 391 - -
Bva11g01136 395 PANTHER NADPH-DEPENDENT ALKENAL/ONE OXIDOREDUCTASE, CHLOROPLASTIC 51 395 - -
Bva11g01136 395 ProSitePatterns Quinone oxidoreductase / zeta-crystallin signature. 236 257 IPR002364 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01136 Bva-Chr11 12517871 12520232 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01136 142 305 Monolignol Biosynthesis Gene Families AT1G72680 29.534 8.32e-07 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01136 K18980 - gmx:100780585 627.861
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01136 11 12517871 12520232 Bva11g01136 11 12517871 12520232 ECH