Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01126 ATGGCTTCTTCCGGCAGGATTTTGAAGCTGGTCTCTCGTTCTTTCTCTTCTGCTGCTTCTACTACCTCTTTGTTTTCTCGAGGTAGGAATGGTTACCTGGGCAGTGGACTCAGTAAATACAGCACTGCAGCTGCTACTGAAGAACCAATTAAACCAACCGTTAACATAGAACATACTCAGCTCTTGATTGATGGAAAATTCGTCAATGCCGCTTCTGGAAAAACCTTTCCAACTTTGGATCCCAGAACAGGGGAAGTCATTACTCATGTAGCTGAGGGTGACGCTGAAGATGTTAATCGAGCAGTGTCAGCTGCCCGCAAGGCATTTGATTTAGGGCCTTGGCCAAGGATGACAGCATATGAAAGATCAAGGATATTGTTGCGTTTTGCTGATTTGATTGAAAAGCATAATGATGAGATCGCAGCACTCGAGACTTGGGATAATGGCAAGCCATATGAACAGTCTGCTCAAATTGAAATTCCAATGCTGGTTCGTCTATTTCGATACTATGCTGGTTGGGCTGACAAGATTCATGGTCTAACGGTTCCAGCAGATGGACCATATCATGTGCAAACATTGCATGAACCCATTGGTGTTGCCGGTCAGATTATCCCATGGAATTTTCCTCTTCTCATGTTTGCTTGGAAGGTTGGGCCAGCATTAGCCTGTGGCAACACTATTGTTCTGAAAACAGCTGAGCAGACACCGTTATCTGCTCTATATGTAGCAAAGCTACTTCATGAGGCTGGAGTTCCTGATggtgttttaaatatattatctgGCTTTGGTCCCACTGCCGGTGCAGCTCTTGCTAGTCACATGGATGTGGATAAGCTTGCTTTCACTGGTTCAACTGATACCGGAAAAATTGTCCTTGAACTTGCGGCAAGAAGCAATCTCAAGCCtgtaactttggagcttggtGGGAAATCCCCCTTCATTGTTTGCGAGGATGCTGATGTAGACCAGGCTGTGGAGCAAGCACACTTTGCATTATTCTTTAATCAGGGACAATGCTGCTGTGCCGGGTCTCGTACATTTGTACATGAACGTGTGTACGATGAGTTCATTGAAAAGGCAAAGGCACGTGCTCTGAAACGTTCTGTTGGTGATCCATTCAAGGGGGGAATAGAGCAAGGTCCTCAGATTGATTCAGAACAATTTGAGAAGATTCTGAAGTATATAAGATCTGGTGTTGAAAGTGGAGCAACCCTTGAAACAGGAGGTGACAGACTAGGCAACAAAGGCTTCTACATTAAGCCAACTGTATTCTCAAATGTCCAGGATAATATGTCGATTGCAAAGGATGAAATATTTGGGCCGGTGCAATCCATATTGAAGTTCAGGGACCTTGAGGAGGTTATAAAGAGAGCGAATAACACTAGGTATGGCCTTGCAGCTGGGGTTTATACGAAGAGCTTAGACACTGCTAACATTCTGACCCGATCATTGCGAGCCGGAACAGTGTGGATAAATTGCTTTGACACATTTGATGCTGCAATTCCTTTTGGAGGATACAAGATGAGTGGAATTGGCCGAGAGAAAGGAATATACAGTCTCAACAATTACTTGCAAGTCAAGGCAGTTGTGACTCCGTTGCAGAACCCAACATGGCTTTA 1619 0.4373 MASSGRILKLVSRSFSSAASTTSLFSRGRNGYLGSGLSKYSTAAATEEPIKPTVNIEHTQLLIDGKFVNAASGKTFPTLDPRTGEVITHVAEGDAEDVNRAVSAARKAFDLGPWPRMTAYERSRILLRFADLIEKHNDEIAALETWDNGKPYEQSAQIEIPMLVRLFRYYAGWADKIHGLTVPADGPYHVQTLHEPIGVAGQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYVAKLLHEAGVPDGVLNILSGFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAARSNLKPVTLELGGKSPFIVCEDADVDQAVEQAHFALFFNQGQCCCAGSRTFVHERVYDEFIEKAKARALKRSVGDPFKGGIEQGPQIDSEQFEKILKYIRSGVESGATLETGGDRLGNKGFYIKPTVFSNVQDNMSIAKDEIFGPVQSILKFRDLEEVIKRANNTRYGLAAGVYTKSLDTANILTRSLRAGTVWINCFDTFDAAIPFGGYKMSGIGREKGIYSLNNYLQVKAVVTPLQNPTWL 539
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01126 539 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 27 539 - -
Bva11g01126 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 311 500 IPR016163 GO:0016620
Bva11g01126 539 SUPERFAMILY ALDH-like 55 534 IPR016161 GO:0016491
Bva11g01126 539 CDD ALDH_F2BC 56 531 - -
Bva11g01126 539 Pfam Aldehyde dehydrogenase family 68 529 IPR015590 GO:0016491
Bva11g01126 539 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 73 529 IPR016162 GO:0016491
Bva11g01126 539 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL-LIKE 27 539 - -
Bva11g01126 539 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 305 312 IPR029510 GO:0016491
Bva11g01126 539 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 333 344 IPR016160 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01126 Bva-Chr11 12461396 12465658 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01126 6 539 Aldehyde Dehydrogenase Gene Family AT3G48000 77.985 0.0 885
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01126 K00128 - gmx:100782019 955.281
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01126 11 12461396 12465658 Bva11g01126 11 12461396 12465658 ECH