Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01119 ATGCCGTTTGGTTTGGTCTCAGCCTGGAACAAGCGCCGTAGAAGCAAGTCTCAAGATACAGACCCttGGGTTTATAAACCTGCGGGGTTGTGGAAACTTGAAGATCAAACACCAAAACCCACAAAAAGGCGGCATGGATCATCTGTTTTCACACTCAGAGAGATGGAAGAGGCAACATGTTCATTCAGTGATGATAATATGCTTGGAAAAGGAGGATTTGGCAGGGTCTACCGGGGCACTTTGCGGTCAGGAGAGGTTGTAGCAATCAAGAAAATGGAGCAGCCAGCATTTAAAGAAGCAGAGGGGGAGCGTGAGTTCCGAGTTGAAGTTGATATCTTGAGCAGACTTGACCACCCAAATCTTGTTTCTTTGATAGGCTATTGCGCTGACGGAAAGCACAGATTCTTAGTATACGAATACATGCAGAATGGGAACCTGCAAGATCATTTGAATGGAATTGGGGAGAGAAAAATGGATTGGCCTCGAAGACTCGGAGTGGCACTTGGAGCAGCAAAAGGGCTTGCTTATCTTCATTCAGCTTCTGCTGTAGGGATTCCGATTGTTCATAGGGACTTCAAATCTACCAATGTTCTATTAGATGCCAACTTTGAGGCAAAGATATCTGATTTTGGGCTTGCCAAGTTAATGCCAGAAGGCCAGGAGATACATGTCACCGCCAGAGTACTTGGGACCTTCGGCTATTTTGATCCTGAGTACACTTCGACTGGTAAACTCACTCTTCAAAGTGACGTTTATGCTTTTGGTGTTGTCCTTCTTGAGCTTTTGACAGGACGTCGAGCAGTAGATCTAAACCAGGGTCCGAATGACCAAAACCTCGTATTACAGGTGAGGCACATACTGAACGACCGCAAGAAGCTCCGTACGGTGATAGATCCAGAGATGGCTCGAAATTCTTACATCATAGAATCTATTGCCATGTTTGCCAATCTGGCATCACGGTGTGTCCGTACTGACAGTAGTGAGAGGCCCTCCATGCCAGAATGTGTAAAAGAACTTCAAATGATTATCTATACAAATTCAAAAGGTTTGGGAATGGTTATGCACAGTTTGAGAATAATCTA 1082 0.4492 MPFGLVSAWNKRRRSKSQDTDPWVYKPAGLWKLEDQTPKPTKRRHGSSVFTLREMEEATCSFSDDNMLGKGGFGRVYRGTLRSGEVVAIKKMEQPAFKEAEGEREFRVEVDILSRLDHPNLVSLIGYCADGKHRFLVYEYMQNGNLQDHLNGIGERKMDWPRRLGVALGAAKGLAYLHSASAVGIPIVHRDFKSTNVLLDANFEAKISDFGLAKLMPEGQEIHVTARVLGTFGYFDPEYTSTGKLTLQSDVYAFGVVLLELLTGRRAVDLNQGPNDQNLVLQVRHILNDRKKLRTVIDPEMARNSYIIESIAMFANLASRCVRTDSSERPSMPECVKELQMIIYTNSKGLGMVMHSLRII 360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01119 360 ProSiteProfiles Protein kinase domain profile. 62 343 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01119 360 Gene3D Transferase(Phosphotransferase) domain 1 141 351 - -
Bva11g01119 360 PANTHER OS01G0750732 PROTEIN 1 360 - -
Bva11g01119 360 PANTHER SERINE/THREONINE KINASE FAMILY PROTEIN 1 360 - -
Bva11g01119 360 ProSitePatterns Protein kinases ATP-binding region signature. 68 91 IPR017441 GO:0005524
Bva11g01119 360 SUPERFAMILY Protein kinase-like (PK-like) 38 345 IPR011009 -
Bva11g01119 360 Gene3D Phosphorylase Kinase; domain 1 31 140 - -
Bva11g01119 360 PIRSF ILK 24 351 - -
Bva11g01119 360 CDD STKc_IRAK 68 340 - -
Bva11g01119 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Bva11g01119 360 Pfam Protein kinase domain 63 337 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01119 Bva-Chr11 12436384 12439055 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01119 45 339 Receptor kinase-like Gene Family AT3G58690 46.667 2.28e-88 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIb Bva11g01119 Pkinase 6.2e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01119 - - gmx:100777910 647.891