Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01117 atgaAGAACGGCAAAATGGTGTGGATGAGGGTGAATAGTAAACAGAAATTGGTGCCATTTGTGGGAATGGTGATTGCTATAATGACTCAAACGAGCAGCATGGTGGTACTCAAAGTTGCAATGACTAACGGAACTGACAAGTATGTGATTATCGTATACTCTGGTGCAATCTCTACTCTCATCCTTCTCTTCCCTGCCTTCCTTCTTCACAGGTCAGGGCGTCCTCCACTTACCTTCTCTGTGCTTTGCAGCTTCTTTGTCCTTTCCCTACTTGGATGTGGAGCACAGATATCGGCTTATATTGGCATAGGTTTGAGCTCTCCTACACTTGCAATGGCCATGATGAATCTCATTACACCTTTCACTTTCATCCTTGCTCTCATTTTCAGGATGGAAGCATTTAATTGGAGACATTCTAGCAGCCAAGTGAAAGTGTTAGGAACTATAATATCAATTTCAGGAGCATTGGTGATAACATTCTACAAGGGCCCATCAATCTTGAAGCCACAATATTCTTCTCGCAATAAACTTGCTGTTCCATCACAACTGAACTGGATCTATGGAGCTTTGGTCTGTGCTACCGAAGCTTTCTTGGCTTCAGCATGTTACATATATCAGGCTCACATTATAAAGAAATACCCTGCTCTCATGTTTGTAGCCTTCCACCAAGTCTTCTTTGGCACCATTCTCTCTTCGGTGTTTTCCTTATTTGCAGTCACAAATCCGAGGGCATGGGTGGTAAAGCTTGATATGGGGTTATTTGCCATTTTATACCagGCTGTGATTGTAGTCACGTTATGCTATGCATTGATCTTATGGTGCTTGCAAAAAACTGGACCTCTGTTTTGTGCTATGTTCAAACCTTTGGGAATTGTATTTACAATTATCATGAGTGCAACCTTTTTGGGAGAAGATTTTCACCTTGGAAGTTTGATTGGTGCAGTTATGATTGTGTTGGGACTTTATGGTGTGATGTGGGGGAAGGCCTTAGAAGAGAAGATTCAGCTGGAGCTGGGAGGTGGCTCACCATCTTTTGCCAAAACTGTTATCACTAATGGAATGAGCTCTTTTGTGTTCATTGGCTATAGTAATGCCCTGGCCAGTTTAGTTCTCTTTCCCTGCTCCTTTTTTTCACACAGCAAGGACagGGGATCAAAGCAGCCACCTTTTACTTTGCCTTTGTTTACGCGAAACTTGTTCTTGGGTTTAGTAGGGATAACCATGACCCAGATATTTTTATTCGTGGGTCTAAGCTACAGTTCGCCAATTCTTGTATGTGCAATGGGCCATTTGATCCCAGCTTGCAATTTCCTGCTCTCAGTCATTCTGAGGAAAATGAACTTCGATTTAAGAAGCTCTGCTATCCGATTCCAAGTGCTTGGCACCCTGATATCAATATTGGGAGCAGTAGAAGTGGAATTGTTCAAGGGGCCTCTTCTAATACATTCTTCTGATCATCAACTCCGACGCACTAAGCAACTCTTTGTCTTCTCCTCAACACCTGAGTTTTGGATTCTTGGTGGCATCTTGCTTGCTGCTGCTTCTTTCTCTGTTGCACTTTGGAACTTCATTCAGAAGGAAACCGTTAAGCAATATCCAGAACTTGAAGCAATGAAGGTGGTCACATGCTATACCTCACTTGGGACGGTGCTAAGTGCAATAGTCTCCTTAATGATAGAGAGAGACCCTATTTTTTGGAAGCTAAACCACAACATGGAGCTCATTCTAATTGTTTTAACTGCAATATTTGGTGGGGTTATTCGTCCCAATATCCAAATTTGGTTCACACGCATGAAGGGCCCATGTTATGTGCCATTGTTTAAGCCCTTTGGTATTGCTTATGCAACCACTTTTGGAGTTAGCTTCTTCCCGAACAGCCTTCACTGTGGAAGTGTGATTGGAGCCACTATAATAGGAATGGGGTATTATACTGTGATATGGGGACAGATCAAAGGAGATGAAGACGACAAAATCAAAAAGCCTTGTGACAATAGCTCAGATTCTTTGGACAAGAAAATCCCCTTTTTGCAAGAAAAAGTGGAAGAAGAGGTGTA 2054 0.4226 MKNGKMVWMRVNSKQKLVPFVGMVIAIMTQTSSMVVLKVAMTNGTDKYVIIVYSGAISTLILLFPAFLLHRSGRPPLTFSVLCSFFVLSLLGCGAQISAYIGIGLSSPTLAMAMMNLITPFTFILALIFRMEAFNWRHSSSQVKVLGTIISISGALVITFYKGPSILKPQYSSRNKLAVPSQLNWIYGALVCATEAFLASACYIYQAHIIKKYPALMFVAFHQVFFGTILSSVFSLFAVTNPRAWVVKLDMGLFAILYQAVIVVTLCYALILWCLQKTGPLFCAMFKPLGIVFTIIMSATFLGEDFHLGSLIGAVMIVLGLYGVMWGKALEEKIQLELGGGSPSFAKTVITNGMSSFVFIGYSNALASLVLFPCSFFSHSKDRGSKQPPFTLPLFTRNLFLGLVGITMTQIFLFVGLSYSSPILVCAMGHLIPACNFLLSVILRKMNFDLRSSAIRFQVLGTLISILGAVEVELFKGPLLIHSSDHQLRRTKQLFVFSSTPEFWILGGILLAAASFSVALWNFIQKETVKQYPELEAMKVVTCYTSLGTVLSAIVSLMIERDPIFWKLNHNMELILIVLTAIFGGVIRPNIQIWFTRMKGPCYVPLFKPFGIAYATTFGVSFFPNSLHCGSVIGATIIGMGYYTVIWGQIKGDEDDKIKKPCDNSSDSLDKKIPFLQEKVEEEV 684
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01117 684 SUPERFAMILY Multidrug resistance efflux transporter EmrE 231 329 - -
Bva11g01117 684 Pfam EamA-like transporter family 188 325 IPR000620 GO:0016020|GO:0016021
Bva11g01117 684 Pfam EamA-like transporter family 346 470 IPR000620 GO:0016020|GO:0016021
Bva11g01117 684 PANTHER WAT1-RELATED PROTEIN 346 668 - -
Bva11g01117 684 PANTHER WAT1-RELATED PROTEIN 18 336 - -
Bva11g01117 684 PANTHER WAT1-RELATED PROTEIN 346 668 IPR030184 GO:0016021|GO:0022857
Bva11g01117 684 PANTHER WAT1-RELATED PROTEIN 18 336 IPR030184 GO:0016021|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01117 Bva-Chr11 12426638 12432816 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01117 346 683 Nodulin-like Gene Family AT1G70260 46.784 8.57e-95 296
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01117 - - var:108330423 550.436