Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01115 ATGGCAAATCTACTTCCATATTTGGGAATGGTAATTGTTGTTCTCACTCATAGTGGGAATGTAGTGGTAAGTAAAGTAGCCATAAGTGATGGGTTTAACAAGTATGTAATGGTCGTCTACTCTTTTGCTCTCTCCACCCTCATCCTTTTCCCCTGTGCATTCCTTTTTAGCAgGTCCGAGCGTCCTCCAGTTACCTTCTCCGCGTTCTGCCGCTTCTTTCCTCTTGGATTTTTTGGATGCTCTGCACAGATATTGTCTTTTGTTGGCGTAGATTTGAGCTCACCAACTCTTGCCACGGCGCTGCTCAACCTCATTCCAGCTTTCACTTTTGTGCTTGCTCTCATTTTCAGGATGGAAGAAGTACACTGGAGACATTCTAGTAGCCAAGCTAAGGTTATGGGAACTATAGTATCAATTGCAGGAGCATCTGTTGTGATATTCTACAAGGGCCCAACTATCTTCAAGTTACATTCTTCAGTCTCTTACAGCAATGTTCTTTTCTCACCACAATTGAAGTGGATCATGGGAGGCATTTATTTAACTGCTgagtgtttcttcgtttccctATTGTACATATATCAGGCTTCAGTTATGAAGAAATACCCTGCTGTAATGGTGGTAGTCTTCTTCCAACTCTTCTTTTCCACCATTATCTCTGCAGtgttttccttctttgctGTTACAGATAAAAGCGCATGGGTTCTAAAGCTTAATAATATGGGTCTGGTAGCCATTTCATACCAGGCAATTGCTGCGAACGCGGTCCGGCACTTTCTAATCATATGGTGTGTGCACAAAACTGGACCTGTGTTTTGTGCTATGTTCAAGCCCATAGGAATCATATTCACTGTTACCATGGATGTACTTTTTCGTGGGGATGATTTCCATCTTGGGAGTTTGGTTGGTGCGGTTATAATTGTGATTGGATTTTATTGTATGATGTGGGCGAAGGCCAAGGAAGGGAAGAAAGTTAAGCAAGGAATTGAGAACTTGGAAGCGTGTGGCCACAAGTGCCCTACCATTAGAGTGGACAAAATGGTGAGAGGGTCAACAACACTAGAGTCTATCGTGATAACTGACAAGACGTTTGACCCACCTGGCTTCCTCCATAAATCATA 1118 0.415 MANLLPYLGMVIVVLTHSGNVVVSKVAISDGFNKYVMVVYSFALSTLILFPCAFLFSRSERPPVTFSAFCRFFPLGFFGCSAQILSFVGVDLSSPTLATALLNLIPAFTFVLALIFRMEEVHWRHSSSQAKVMGTIVSIAGASVVIFYKGPTIFKLHSSVSYSNVLFSPQLKWIMGGIYLTAECFFVSLLYIYQASVMKKYPAVMVVVFFQLFFSTIISAVFSFFAVTDKSAWVLKLNNMGLVAISYQAIAANAVRHFLIIWCVHKTGPVFCAMFKPIGIIFTVTMDVLFRGDDFHLGSLVGAVIIVIGFYCMMWAKAKEGKKVKQGIENLEACGHKCPTIRVDKMVRGSTTLESIVITDKTFDPPGFLHKS 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01115 372 PANTHER WAT1-RELATED PROTEIN 6 339 - -
Bva11g01115 372 Pfam EamA-like transporter family 177 314 IPR000620 GO:0016020|GO:0016021
Bva11g01115 372 Pfam EamA-like transporter family 6 146 IPR000620 GO:0016020|GO:0016021
Bva11g01115 372 PANTHER WAT1-RELATED PROTEIN 6 339 IPR030184 GO:0016021|GO:0022857
Bva11g01115 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 221 318 - -
Bva11g01115 372 SUPERFAMILY Multidrug resistance efflux transporter EmrE 42 148 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01115 Bva-Chr11 12421796 12426036 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01115 3 330 Nodulin-like Gene Family AT5G40240 40.476 1.55e-76 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01115 - - gmx:100816194 428.328