Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01113 ATGGAAGAACATCTCAATCCATTGGCTGTTACCCATCTTCTTCAGCACACACTGAGAAGCTTGTGCATCCATGAAAACTCTCAATGGGTTTATGCAGTCTATTGGAGGATCTTGCCTCGCAACTACCCACCACCCAAgtggGAAGGTCAAGGGGCTTATGATAGATCAAGAGGGAACAGAAGGAACTGGATATTGGTCTGGGAAGATGGTTTCTGCAATTTTGCTGCCTCATCAGCACCTGAAAGCAGCCCCGGTGACTGTGGTGGCTCATCGGTTTACGGGAACTGTGAGTTCCAGCAATACCAAGGGCTACAACCTGGGCTTTTCTTCAAGATGTCACATGAGATCTATAACTATGGAGAAGGGTTGATAGGGAAAGTGGCTGCAGATCACAGCCACAAGTGGATATATAAAGAACCCAATGATCAAGAAATCAACTTCTTGTCAGCATGGCACAGCTCAGCTGACTCGCACCCTCGGACTTGGGAAGCACAGTTCCAGTCTGGTATAAAGACCATAGCCCTTATTGCTGTAAGAGAAGGTGTTGTTCAATTAGGAGCTATTCACAAGGTGATGGAAGACCTGAGCTACGTGGTTCTATTGAGAAAGAAGTTCAGCTATATAGAGAGCATCCCGGGTGTGCTATTGCTACACCCATCATATTCAGCATACCCATATAAGCTGGAAGGATATGGTGTCCCATCTGAACAATGGCATAATTTCCAAGCAAGTCTTGCACCTGCAGCCgaattatatgattataataataaccaGCTGCAGCCACTGAAAATAACTCCCTCAATGAGCAGCCTCGATGCACTCCTCTCTAAGCTCCCCTCAGTGGTTCCACCACCAACACAGCCACAATCCCATTTCATGCCATCATCACAGAGGCCTTTAGAATTCATGGCAACGCAGAAAATAGCAAGGGAAGAGAATAATGATGAAGAGGTATATCGGCCAGAACTGGATGCTGGTGAAAGCAGCAGTTCCATACTACCATACCGGCATCATCAACATTTTCATGATCAGAATGTGACTAATAGTGGAGCCAATAATGGATTTTG 1067 0.4499 MEEHLNPLAVTHLLQHTLRSLCIHENSQWVYAVYWRILPRNYPPPKWEGQGAYDRSRGNRRNWILVWEDGFCNFAASSAPESSPGDCGGSSVYGNCEFQQYQGLQPGLFFKMSHEIYNYGEGLIGKVAADHSHKWIYKEPNDQEINFLSAWHSSADSHPRTWEAQFQSGIKTIALIAVREGVVQLGAIHKVMEDLSYVVLLRKKFSYIESIPGVLLLHPSYSAYPYKLEGYGVPSEQWHNFQASLAPAAELYDYNNNQLQPLKITPSMSSLDALLSKLPSVVPPPTQPQSHFMPSSQRPLEFMATQKIAREENNDEEVYRPELDAGESSSSILPYRHHQHFHDQNVTNSGANNGF 355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01113 355 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 14 205 IPR025610 -
Bva11g01113 355 PANTHER TRANSCRIPTION FACTOR MYC/MYB-RELATED 1 347 - -
Bva11g01113 355 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK (WITH NO LYSINE)-LIKE PROTEIN 1 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01113 Bva-Chr11 12404647 12406841 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01113 13 250 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 28.916 4.91e-17 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01113 - - vun:114173114 569.696