Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01107 ATGGTATCAAGATCGTATGTTAATCTCCTAGACCTAGCTGCTGGAGACTTACTGGATATTCCTCATACGCCTCGAACTCTTCCAAGGGTTATGACAGTCCCTGGAATTATTTCTGACATGGATAGTGTTGGTGGCAATGATGGGGATTCAGATGTTAGCTCTTCTGGGTGTAGGGAGCGGAAAATTATAGTGGCAAACATGCTTCCTTTGCAGGCTAAAAAGGATACAGAAACTGGTAAATGGTGCTTCAGTCTGGATGAGGATTCAATCTTGCTACAATTAAAAGATGGTTTTTCTTCTGATATTGAGTTTATCTATGTTGGGTCCCTCAAGGTTGAAATAGATGCCAGTGAACAGGAAGAAGTTGCTCAGAGATTACTGGAGAATTTTAATTGTGTGCCAACTTTTTTACCTCACGATATCCAGAAAAAATTCTATCTTGGCTTTTGTAAGCAGCAGTTATGGCCTCTCTTTCACTACATGCTACCCATGTGCCCAGATTATGGTGCCCGCTTTGACCGTGTGCTCTGGCAGGCTTATGTTTCTGCGAACAAAATATTTTCGGACAAGCGGTATAATCGAGTTAAACTTGGATTCTTTCTTCACAGTCCTTTCCCTTCATCTGAAATTTACCGAACTTTGCCAACACGAGATGAAATTCTGAGGGGACTGTTGAATTCTGACTTGATTGGTTTCCATACATTTGATTATGCTCGCCACTTCCTCTCCTGCTGCAGTAGAATGCTGGGTCTTGACTATGAGTCTAAACGGGGACACATAGGACTTGATTACTTTGGCCGCACAGTGTTCATCAAAATTTTGCCAGTAGGCATTCACATGGGCAGGCTTGAATCTGTTCTAAACCTTCCTTCTACAtctattaaaatgaaagaaattcaagaagaGTTTAAGGGTAGGAAGGTGATTGTTGGTATAGATGACATGGATATATTTAAAGGAATCAGTCTGAAACTTCTAGCTGTGGAACAGTTGCTACAGCAGAATCAAGACTTGCACGGTAAAGTTGTCCTAGTTCAAATTGTGAATCCTGCAAGGGGTTCAGGAAAGGATGTTCAGGAAGCAAAGAAGGAAACGTATTTAATTGCCCAAAGGATCAATGATACTTATGGTTCACATCATTATCAGCCGGTTATTCTTATAGACCGACCTGTTCCTCGTTTTGAGAAGAGTGCCTATTATGCTGTAGCAGAGTGTTGCATTGTCAATGCTGTAAGGGATGGTATGAACTTAGTCCCGTACAAGTATATTGTCTGCAGACAGGGAACTCCAAAACTGGATGAAGCATTGGGCAGAAAAAGTGAATATACTCATACAAGTATGCTTGTTGTATCTGAGTTCATTGGTTGTTCACCCTCTCTAAGTGGGGCAATCAGGGTTAATCCATGGGACGTAGATGCTGTTGCCGATGCTTTGAATTCGGCCCTCACTATGTGTGATTCAGAGAAGCAATTGCGGCATGAAAAGCATTATAGATATGTCAGCTCCCATGATGTGGCTTATTGGGCACGCAGTTTTATGCAGGATTTGGAGAGAGCATGCAAAGATCATTACACCAAAAGATGCTGGGGGATTGGTTTGGGCCTAGGCTTCAGAgttgtttctctttctcccgGTTTTAGGAAGTTGTCTATTGATCACATTGTTTCAGCTTACAAAAGAACCAATAGGAGGGCTATATTTCTCGACTATGATGGTACTATTGTACCACAGTCTTCTATTGTGAAAGCCCCCAGCCCGGAAGTCATATCTGTGTTAAATACTTTGTGTAATGATCCCAAGAACACTGTATTCATTGTTAGTGGGAGGGGAAGAGATCCTCTGAGCGATTGGTTTGATTCATGCAAAATGCTGGGACTTGCTGCTGAACATGGGTACTTTTTAAGATGGAGTAGAGACTCCGAATGGGAATCTAGTCACTTGTCTGCCGACCTGGAATGGATAAAGATAGTGGAACCTGTGATGAGGTTGTATACGGAGGCAACTGATGGGTCTAATATTGAGGTTAAAGAAAGTGCTTTGGTGTGGCATCATCAAGACGCAGACCCTGACTTCGGTTCTTGCCAAGCCAAGGAATTGTTGGATCACTTGGAAAGTGTGCTTTCCAATGAACCAGCAGTCGTCAACAGGGGCAAACATATTGTTGAAGCCAAGCCACAGGGAATAAGCAAAGGTTTGGTAGCTGAAAACGTTCTTTTGACCATGGTCAATGATGGGAATCCACCTGATTTGATAATATGCATAGGAGACGATCGGTCCGACGAAGACATGTTTGAAAGTATATCACGGTCAGTTTCTAGTCCATCAATGCGAATTACTCCAGAGATCTTTGCTTGCACGGTTGGACGAAAGCCCAGCAAGGCTAAATATTATCTTGATGATTCTGCTGATGTTGTAAAGTTGCTTCAAGGCCTTGCCACTGCATCAAATCCAAAGCCTAGGTATCTTGCCCATTTCCAGGTTTCATTTGAGAGCACAGTTTG 2501 0.419 MVSRSYVNLLDLAAGDLLDIPHTPRTLPRVMTVPGIISDMDSVGGNDGDSDVSSSGCRERKIIVANMLPLQAKKDTETGKWCFSLDEDSILLQLKDGFSSDIEFIYVGSLKVEIDASEQEEVAQRLLENFNCVPTFLPHDIQKKFYLGFCKQQLWPLFHYMLPMCPDYGARFDRVLWQAYVSANKIFSDKRYNRVKLGFFLHSPFPSSEIYRTLPTRDEILRGLLNSDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVFIKILPVGIHMGRLESVLNLPSTSIKMKEIQEEFKGRKVIVGIDDMDIFKGISLKLLAVEQLLQQNQDLHGKVVLVQIVNPARGSGKDVQEAKKETYLIAQRINDTYGSHHYQPVILIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPKLDEALGRKSEYTHTSMLVVSEFIGCSPSLSGAIRVNPWDVDAVADALNSALTMCDSEKQLRHEKHYRYVSSHDVAYWARSFMQDLERACKDHYTKRCWGIGLGLGFRVVSLSPGFRKLSIDHIVSAYKRTNRRAIFLDYDGTIVPQSSIVKAPSPEVISVLNTLCNDPKNTVFIVSGRGRDPLSDWFDSCKMLGLAAEHGYFLRWSRDSEWESSHLSADLEWIKIVEPVMRLYTEATDGSNIEVKESALVWHHQDADPDFGSCQAKELLDHLESVLSNEPAVVNRGKHIVEAKPQGISKGLVAENVLLTMVNDGNPPDLIICIGDDRSDEDMFESISRSVSSPSMRITPEIFACTVGRKPSKAKYYLDDSADVVKLLQGLATASNPKPRYLAHFQVSFESTV 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01107 833 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 521 - -
Bva11g01107 833 Gene3D Glycogen Phosphorylase B; 191 284 - -
Bva11g01107 833 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 188 824 IPR001830 GO:0003824|GO:0005992
Bva11g01107 833 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 565 771 IPR006379 -
Bva11g01107 833 Gene3D Glycogen Phosphorylase B; 285 501 - -
Bva11g01107 833 Pfam Trehalose-phosphatase 567 801 IPR003337 GO:0003824|GO:0005992
Bva11g01107 833 Gene3D Glycogen Phosphorylase B; 50 190 - -
Bva11g01107 833 Pfam Glycosyltransferase family 20 60 190 IPR001830 GO:0003824|GO:0005992
Bva11g01107 833 Pfam Glycosyltransferase family 20 191 517 IPR001830 GO:0003824|GO:0005992
Bva11g01107 833 CDD GT20_TPS 60 517 IPR001830 GO:0003824|GO:0005992
Bva11g01107 833 Gene3D - 563 679 IPR023214 -
Bva11g01107 833 Gene3D - 693 824 IPR023214 -
Bva11g01107 833 CDD HAD_TPP 565 806 - -
Bva11g01107 833 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 188 824 - -
Bva11g01107 833 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE [UDP-FORMING] 9-RELATED 1 190 - -
Bva11g01107 833 SUPERFAMILY HAD-like 564 812 IPR036412 -
Bva11g01107 833 TIGRFAM T6PP: trehalose-phosphatase 562 812 IPR003337 GO:0003824|GO:0005992
Bva11g01107 833 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 190 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01107 Bva-Chr11 12354201 12359008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01107 1 833 Trehalose Biosynthesis Gene Families AT1G60140 72.125 0.0 1319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01107 K16055 - gmx:100775779 1455.65