Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01089 ATGCCGGGGAGTCGATCAAAATCGGAGAAGCATGGTGCTTCGAAGCAGCTCCGGCGGGATCCTTACGAGGTCCTCGGTGTCTCGCGCAACTCAATTGATCAGGAAATCAAAAGCGCTTACCGGAAGATGGCGCTCAaATATCATCCTGACAAGAATGCTAATGATCCTCAAGCAGCTGATATGTTTAAAGAGGTTACCTTTTCATACAATATCTTGTCAGATCCAGAAAAAAGGCGTCAGTATGACTCAGCTGGTATTGAGGCTGTTGAATCTGATAGCCAAGACTTAGAGTTGGATCTTTCAAGTTTGGGTGCTGTGAATACAATGTTTGCCGCGCTTTTTAGTAAACTTGGTGTTCCGATTAAGACAACTGTTTCAGCAACTGTTTTGGAAGAGGCACTGAATGGTTTGGTGATCATTCGCCCACTTCCATTGGGGCAGCCTATATCTAAAAGGGTTGAGAAGCAATGTGGTCACTTCTATTCAGTTACAATTACAGAAGAGGAAGCAAGGGCTGGATTTGTTTGCCGAGTACAATCATCAGATAAAAGCAAGTTCAAGttattatattttgatcaagaagaaaatggtggATTAAGTCTTGCACTCCAGGAAGACAGTGCAAAAACAGGGAAGGTTACCTCTGCTGGAATGTATTTTCTTGGGTTTCCAGTGTATCGATTAGATCAAACAACAAATTCAATAGCTGCTGCTAAGGACCCAGATACTTCTTTTTTCAGAAAGTTGGACGGGTTCCAACCATGTGAACTAACAGAATTGAAGGCTGGCACGCATGTCTTTGCAGTTTATGGTGATAACTTTTTCAAAAGCGCAAGCTATACAATAGAAACTATATGTGCTGCACCTTAtagtgaagaaaaagagaatctGAGGAATATAGAAGgtcaaattttatcaaaaaaggCAGAACTATCCAAGTTTGAAACTGAATACAGAGAGGTTCTGGCACAATTTACGGAGATGACAAGCAGATATGCGCAAGAAATGCAAGCGATTGATGAGCTACTGAAGCAAAGAAGTGAAATACATGCATCATATACAATTGCTCCTTCAAAGAGGAGTACAAGTAAGAGCAGGAGTAGAAATTCTTCCAAAGAGGCTAAAGAAGATGGACaagcaagagagaaaagaCATACAAGAGATCggccaaagaagaagaaatggtaTAACGTACACCTTAAAGTTGATAAGAGAAAGTCTTGCTA 1226 0.3801 MPGSRSKSEKHGASKQLRRDPYEVLGVSRNSIDQEIKSAYRKMALKYHPDKNANDPQAADMFKEVTFSYNILSDPEKRRQYDSAGIEAVESDSQDLELDLSSLGAVNTMFAALFSKLGVPIKTTVSATVLEEALNGLVIIRPLPLGQPISKRVEKQCGHFYSVTITEEEARAGFVCRVQSSDKSKFKLLYFDQEENGGLSLALQEDSAKTGKVTSAGMYFLGFPVYRLDQTTNSIAAAKDPDTSFFRKLDGFQPCELTELKAGTHVFAVYGDNFFKSASYTIETICAAPYSEEKENLRNIEGQILSKKAELSKFETEYREVLAQFTEMTSRYAQEMQAIDELLKQRSEIHASYTIAPSKRSTSKSRSRNSSKEAKEDGQAREKRHTRDRPKKKKWYNVHLKVDKRKSC 408
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01089 408 Coils Coil 290 317 - -
Bva11g01089 408 Pfam DnaJ domain 20 82 IPR001623 -
Bva11g01089 408 Gene3D DnaJ domain 3 102 IPR036869 -
Bva11g01089 408 ProSiteProfiles dnaJ domain profile. 20 85 IPR001623 -
Bva11g01089 408 PANTHER DNAJ DOMAIN-CONTAINING PROTEIN-RELATED 1 407 - -
Bva11g01089 408 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 1 407 - -
Bva11g01089 408 SMART dnaj_3 19 77 IPR001623 -
Bva11g01089 408 MobiDBLite consensus disorder prediction 353 397 - -
Bva11g01089 408 PRINTS DnaJ domain signature 57 77 IPR001623 -
Bva11g01089 408 PRINTS DnaJ domain signature 22 40 IPR001623 -
Bva11g01089 408 PRINTS DnaJ domain signature 40 55 IPR001623 -
Bva11g01089 408 PRINTS DnaJ domain signature 77 96 IPR001623 -
Bva11g01089 408 CDD DnaJ 20 74 IPR001623 -
Bva11g01089 408 SUPERFAMILY Chaperone J-domain 19 89 IPR036869 -
Bva11g01089 408 ProSitePatterns Nt-dnaJ domain signature. 62 81 IPR018253 -
Bva11g01089 408 MobiDBLite consensus disorder prediction 1 21 - -
Bva11g01089 408 MobiDBLite consensus disorder prediction 366 384 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01089 Bva-Chr11 12259679 12264211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01089 13 83 C2H2 Transcription Factor Family AT1G74250 42.105 1.57e-11 64.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01089 - - gmx:100800929 710.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01089 11 12259679 12264211 Bva11g01089 11 12259679 12264211 ECH