Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01081 ATGGCACAAAATGGTGTTGTCACTGCTCCGGGCACAAAGTGGTCGGAGAAAGCCGACAGCTTCGGCCTCTCGCCGCCGGAATCAGACGAGGTTCACGTATTGGCAGTCGATGACAGCCTTGTTGATCGCAAAGTCATTGAGCGCTTACTCAAAATTTCAGCTTGTAATTGTAAAGTCACTGCTGTGGAAAGTGGAATAAGAGCTCTGCAATTTCTGGGACTGGACACAGAGAAGAGCCCCTCCGACGGCTTTGATAGTTTAAAGGTGGATCTGATAATCACAGACTACTGTATGCCTGGAATGACTGGTTATGAGCTGCTGAAGAAAATCAAgGAATCGTCTACTTTCAAGCAGATTCCAGTGGTGATTATGTCCTCAGAGAATGTGTTGGCGCGTATAGacagATGCTTGGAGGAAGGTGCAGAGGATTTCATAGTGAAGCCAGTGAAACTATCTGACGTGAAACGTTTGAAGGATTATTACATGACGAGAGAGGTTAGGGCGGGAAGCTACCAAGACAGAGAAGAAGCTGGGAGGATCAACAAGAGAAAGCTACCAGACACTGACACCACCCCTGATGATCTGTCTTCATCACAGCCGTCCATTTCTACATCGGCTCCCCCATCATCACCATCGAGTTCGCCGCCTTCTTCATCCTCATCAGTACCTTCATCTCCACCAACGGTGCTCGATTCTCCGATCAGACGACTTAAAATGACCAGCACCGATTG 731 0.4788 MAQNGVVTAPGTKWSEKADSFGLSPPESDEVHVLAVDDSLVDRKVIERLLKISACNCKVTAVESGIRALQFLGLDTEKSPSDGFDSLKVDLIITDYCMPGMTGYELLKKIKESSTFKQIPVVIMSSENVLARIDRCLEEGAEDFIVKPVKLSDVKRLKDYYMTREVRAGSYQDREEAGRINKRKLPDTDTTPDDLSSSQPSISTSAPPSSPSSSPPSSSSSVPSSPPTVLDSPIRRLKMTSTD 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01081 243 CDD REC_typeA_ARR 33 157 - -
Bva11g01081 243 MobiDBLite consensus disorder prediction 191 208 - -
Bva11g01081 243 SMART REC_2 31 161 IPR001789 GO:0000160
Bva11g01081 243 MobiDBLite consensus disorder prediction 169 243 - -
Bva11g01081 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-RELATED 12 242 - -
Bva11g01081 243 Gene3D - 31 202 - -
Bva11g01081 243 ProSiteProfiles Response regulatory domain profile. 32 162 IPR001789 GO:0000160
Bva11g01081 243 MobiDBLite consensus disorder prediction 169 190 - -
Bva11g01081 243 Pfam Response regulator receiver domain 33 154 IPR001789 GO:0000160
Bva11g01081 243 SUPERFAMILY CheY-like 31 163 IPR011006 -
Bva11g01081 243 PANTHER TWO-COMPONENT RESPONSE REGULATOR 12 242 IPR045279 GO:0009736
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01081 Bva-Chr11 12218132 12219850 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01081 24 235 Response Regulator Gene Family AT1G59940 60.930 2.20e-74 227
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Bva11g01081 Response_reg 5.8e-21 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01081 K14492 - mnt:21410451 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01081 11 12218132 12219850 Bva06g01299 06 9834684 9836717 BWGD
Bva11g01081 11 12218132 12219850 Bva11g01081 11 12218132 12219850 ECH