Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01080 ATGTCTTTGAATGTGATGCTTCAGCCATGGCTGCTTTTGAgccttgtttttgtttctgtaaTACCAATCTATCATTGCCAGCTTGTTTCTGCACCTGAATCTCCAATACAACCACCGCCAGCTGCACCGGAGCAGCAAGCTCCTCCGGCATCAACAAGTTCTTCATCAAAAGGTAAAATAGCAAAGGCAGTGGCAGGAACAGCAGCTGGCACTTTTGTTGTTTCTGGTTTACTCTACTTTTTAATTCATAGGTATTTAAGAGCAAGGCGCAAAAAGGAGGTAGCAAATTCTAGTTCAGCAGGAGTTAGGCGTGTTGTGCCTCAGGTAGATGATCAGTTTGAGAGAATTGAAGGGAATCTGAGGGGATTGATCATTGATGAGAATGGTTTGGATGTGATATATTGGAAAAAGCTTGAAGAGAACTCCGAAAAGGGTCTTCGAAAAGAAGTACTGAATAGAGCTCAAAAGAACGAACAAGAacttgaagatgaagatggtgATGGTGATGATATAGAGAAAGGtaatcaaaggaaaaaatcTGAACCTGTTCATGAAATTCCTCTGCTTCGAGGGAAATCTTCAACTTCCCACATAGCTATATTACCAGAAGAGAATGAAGCTAATAGAGTTAAAAGGAGAACTCCTCCAGCTCCTCCTCCTGCATCAGCCGTGGCTGCTCCCAAGGATGTTGGGAAACTAGACTCACCTGCTCAACCATTTACTCCACCTCCACCACCAAGTTCACCCTTCACTTCTTCTGCAAatgcaaaacagaaaaaccCTGCAACACCACCTCCTCCTCCGTCAATCTCAGTTAGAAAGAGTCCAGCGCCGCCGTCGCCACCACCACCTGCTTCGCCAGTGGTAGCTAGTTTGAGGCCATCATCAAAACCGGCACCTACCCCTTACGAAATGCCTGCTAAGAATAAAGAACATAAGACGCCTTCAGGGGAAGACGTGTCAGAAAGTGGCAATGATCAGGTGAAATTGAAGCCTTTGCATTGGGATAAGGCGAACACTAATGGCGATCACTCTATGGTGTGGGACAAAATTGATGGCGGTTCTGTCAGgTTTGATCAAGATCTTATGGTAGCAATGTTTGGAACCGTTGCCATAAACCGAATATCCCCTAAAGGAAAGAGTAATACAACTAGTCCAACCAGGGATGTTTCTGCTCCATCAGGCAAAACTTTCCTTCTTGATCCAAGGAAATCACAGAACATTGCTATTGTTCTCATATCATTGGCAGTCTCAAGAGAAGAAATCCTTGATGCACTCAAACAGGGTCAAGGCCTTAATGCAGATACTCTTGAAAAGCTTTCTAGAGTTATCCCAACAGAAGAAGAGCAATCTCAAATTCTTGCATATAAAGGAGACCCTTCAAGTCTTGCTGCTGCTGAGGCATTCCTCTATGACATCCTTAAAGCTGTTCCTTCAGCTTTCAAGCGCTTGAACGCCATGCTATTCAGGTTGAACTATGACTCAGAGATTCTACAAATCAAGGAATCTTTACAGACCCTTGAGCTGGGATGCAAGGAGCTAAGAAAAAAGGGAATCTTTGATAGGCTTCTTGAAGCAGTTCTTAAAGCTGGCAACCATATGAATGCAGGTACCTCACGAGGAAATGCTCAAGCTTTCAACTTGACATCTCTCAGGAATCTCTCTGATGTCAAAAGTACTGATGGACAAACCACATTGCTCTACTTTGTGGTTGAAGAAGTAGTAAGGTATGAAGGAAAACGTTGTGTTCTTAACCGAAATCGCAGTCTAAATCGAAGCAGTAGCAGCAGCAGGAATAGCAATGGCGGTAGTAATTTTGAGAACTCTGCTTCAAGTgaacaaagagaaaaggaatacATAACACTCGGATTGCCTATTGTTGGAGGGCTGAGTTCTGAGTTCTCAAACGTGAAAAAAGCATCCCTTATAGATTATAACAGTTTAGTTGGTTCAATCTCAGCACTCTCTGCCCGGATAGTTGAAATTCGgaaaattgtttcaaaatgTAGAAATGATAGAGAAGGAAAGTTTGTGAAGGAAATGGAACATTTTCTTGAGAATGCTGAGGAAGAATTGAAACTACTGAGAGATGAGCAAACAAGGATAGTGCAGCTTGTCAAGAAAACAACAGAATATTATCAAGGAGGAGcttcaaaagaaatggccGAAAATCCAATTCAACTATTTGTCTTAGTGAAGGATTTTCTGGGAATGGTTGATCAAGCCTGCTTTGAGATTGCTCGTAATTTgcagaagaggaagaaaaccaAGCCAAGTTCTTCGTA 2285 0.4009 MSLNVMLQPWLLLSLVFVSVIPIYHCQLVSAPESPIQPPPAAPEQQAPPASTSSSSKGKIAKAVAGTAAGTFVVSGLLYFLIHRYLRARRKKEVANSSSAGVRRVVPQVDDQFERIEGNLRGLIIDENGLDVIYWKKLEENSEKGLRKEVLNRAQKNEQELEDEDGDGDDIEKGNQRKKSEPVHEIPLLRGKSSTSHIAILPEENEANRVKRRTPPAPPPASAVAAPKDVGKLDSPAQPFTPPPPPSSPFTSSANAKQKNPATPPPPPSISVRKSPAPPSPPPPASPVVASLRPSSKPAPTPYEMPAKNKEHKTPSGEDVSESGNDQVKLKPLHWDKANTNGDHSMVWDKIDGGSVRFDQDLMVAMFGTVAINRISPKGKSNTTSPTRDVSAPSGKTFLLDPRKSQNIAIVLISLAVSREEILDALKQGQGLNADTLEKLSRVIPTEEEQSQILAYKGDPSSLAAAEAFLYDILKAVPSAFKRLNAMLFRLNYDSEILQIKESLQTLELGCKELRKKGIFDRLLEAVLKAGNHMNAGTSRGNAQAFNLTSLRNLSDVKSTDGQTTLLYFVVEEVVRYEGKRCVLNRNRSLNRSSSSSRNSNGGSNFENSASSEQREKEYITLGLPIVGGLSSEFSNVKKASLIDYNSLVGSISALSARIVEIRKIVSKCRNDREGKFVKEMEHFLENAEEELKLLRDEQTRIVQLVKKTTEYYQGGASKEMAENPIQLFVLVKDFLGMVDQACFEIARNLQKRKKTKPSSS 761
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01080 761 Gene3D Formin, FH2 domain 341 760 IPR042201 -
Bva11g01080 761 MobiDBLite consensus disorder prediction 590 610 - -
Bva11g01080 761 PANTHER FORMIN-RELATED 29 758 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Bva11g01080 761 MobiDBLite consensus disorder prediction 35 56 - -
Bva11g01080 761 MobiDBLite consensus disorder prediction 155 326 - -
Bva11g01080 761 MobiDBLite consensus disorder prediction 590 612 - -
Bva11g01080 761 Coils Coil 497 517 - -
Bva11g01080 761 SMART it6_source 320 754 IPR015425 -
Bva11g01080 761 MobiDBLite consensus disorder prediction 260 289 - -
Bva11g01080 761 Coils Coil 678 705 - -
Bva11g01080 761 MobiDBLite consensus disorder prediction 376 392 - -
Bva11g01080 761 MobiDBLite consensus disorder prediction 170 186 - -
Bva11g01080 761 ProSiteProfiles Formin homology-2 (FH2) domain profile. 320 761 IPR015425 -
Bva11g01080 761 PANTHER FORMIN-LIKE PROTEIN 4 29 758 - -
Bva11g01080 761 SUPERFAMILY Formin homology 2 domain (FH2 domain) 333 755 - -
Bva11g01080 761 MobiDBLite consensus disorder prediction 376 395 - -
Bva11g01080 761 Pfam Formin Homology 2 Domain 325 739 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01080 Bva-Chr11 12212347 12215713 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01080 8 760 FH2 protein (formin) Gene Family AT1G70140 44.346 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01080 - - vun:114178801 732.25
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01080 11 12212347 12215713 Bva11g01080 11 12212347 12215713 ECH