Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01073 ATGTCTCGCACGTGCTCCCAGTGTGGCAACAACGGCCACAACTCCCGCACGTGTACCGATTCCGGCGGGAGCAGCGGCGGTGCATCGAACGGGATCATGTTGTTCGGTGTGCGACTTACTGAAGGTGGGAGCTCGTTTAGGAAGAGCGCTAGTATGACGAATCTGTCGCAGTTTGATCACGAGCAACAGCCTCAGGATTCCAACCCCGATGCGGGTTATGCCTCTGACGACGTCGTTCACCCCTCTGGTCGTAGCCGCGAGCGTAAGCGAGGTGTTCCATGGACGGAGGATGAGCACAGGCTATTCCTGTTGGGCTTACAGAAAGTCGGGAAAGGAGATTGGAGGGGGATTTCTAGAAGTTTCGTGAAAACTCGGACACCGACTCAGGTAGCGAGTCATGCTCAGAAGTACTTTCTTCGACGGCACAACCAGAACCGGAGGCGCCGGAGATCTAGTCTCTTCGATATCACTACCGAAACggtgATGAAATCATCTAAGATAATGGATGAAGATCAAGTGGTCCATCAGGAAGCAGTGCCGCCCACGCATCCGCAGTCACATCTCAACCACCACCAGCTCGGTCACGGCGCATTGAATTTTTCGATGACGTCGCTACCTCCGGTTGTGGTGGCAGCCGGCGAGAAGCCGATTGAGAATCTCACATTGGGGCCCAGAGTTTTAGCCAAGCCGATTAGGCCTACACCACTTGTGCCAGTGCCAGTGCCGGTTCCTCCGTCAGGGAAAATGGCGAATCTTAACTTGAAGGAGAAATCTGCCATTGATCCTTTGCCATTATCGCTGAAACCGCCGACACCGAATGAGCAGTCGCCGACAGGGAGCCATTCGTCACCGGCTTTAGAGGGTGTGCCTGGCAAGTTTAGCGGTAACGGGGATAACATCATCAGTGTTGCATA 914 0.5405 MSRTCSQCGNNGHNSRTCTDSGGSSGGASNGIMLFGVRLTEGGSSFRKSASMTNLSQFDHEQQPQDSNPDAGYASDDVVHPSGRSRERKRGVPWTEDEHRLFLLGLQKVGKGDWRGISRSFVKTRTPTQVASHAQKYFLRRHNQNRRRRRSSLFDITTETVMKSSKIMDEDQVVHQEAVPPTHPQSHLNHHQLGHGALNFSMTSLPPVVVAAGEKPIENLTLGPRVLAKPIRPTPLVPVPVPVPPSGKMANLNLKEKSAIDPLPLSLKPPTPNEQSPTGSHSSPALEGVPGKFSGNGDNIISVA 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01073 304 MobiDBLite consensus disorder prediction 1 25 - -
Bva11g01073 304 ProSiteProfiles SANT domain profile. 89 142 IPR017884 -
Bva11g01073 304 SUPERFAMILY Homeodomain-like 88 141 IPR009057 -
Bva11g01073 304 ProSiteProfiles Zinc finger CCHC-type profile. 5 20 IPR001878 GO:0003676|GO:0008270
Bva11g01073 304 MobiDBLite consensus disorder prediction 48 92 - -
Bva11g01073 304 MobiDBLite consensus disorder prediction 48 70 - -
Bva11g01073 304 Gene3D - 92 143 - -
Bva11g01073 304 Pfam Myb-like DNA-binding domain 93 138 IPR001005 -
Bva11g01073 304 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 86 142 IPR017930 -
Bva11g01073 304 SMART sant 90 140 IPR001005 -
Bva11g01073 304 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 89 140 IPR006447 GO:0003677
Bva11g01073 304 MobiDBLite consensus disorder prediction 262 304 - -
Bva11g01073 304 ProSiteProfiles Myb-like domain profile. 86 138 IPR001005 -
Bva11g01073 304 CDD SANT 93 138 IPR001005 -
Bva11g01073 304 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 4 304 - -
Bva11g01073 304 PANTHER KIN2 4 304 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01073 Bva-Chr11 12167281 12168837 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bva11g01073 Myb_DNA-binding 4.1e-10 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01073 - - jre:109008681 354.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01073 11 12167281 12168837 Bva06g01291 06 9794285 9796725 BWGD
Bva11g01073 11 12167281 12168837 Bva11g01073 11 12167281 12168837 ECH