Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01047 ATGCCAGAGCCTTCTTCCGTTTACTCTGTTTTCTCTCAGTTCTCCTTGGCGGAGTTGAAGTCTCCGTTGTTTCCCTCCGTTTTCTTTGCTGTTGATTCTAGAAGACAGAGGATGCCGCAACAGTTTGCGTCTCTGAATTTTGTTGCGGTTAAGCAGAATGGTTTGCTGTTGGGATGCTCAGATTCTCCCAAGAAAGGGAAATCTTGCAAAGGTTTGCATTGGGATTATTCTGGGTTCTTGAGGAGGTGTAAAGATTTGGATAGTGAGGAAGATTTTTATCTGGAGCCGGAGATTTTGGAATTCATGAAGAATTCGGAGAATCCAGAAGCCTTTCCTACCGAAAGAGAGTTGGTTGCTGCTGGAAGGATGGATTTGTTGGCCGCCATTATTAAGAAAGGATATTGGCCTTGTCTTGGATGGAATTTGGATGAAGAAGGGCTCGAAGAAATGAGTATCGAAAGTgaggaaaatgaaattctgGGTTCAGGGGCCGATGCATCTTCTTGTAATTCTTCAGCTAGCCTTTCTCAACAAGCTATGTCTTCGGATGAATCAATAGAGCTAAATGTTGAGGAGTCTGGCATTGAGGGCACATTGAATCGACTGGAGAAAGATAGAAATAGCATTCTTGGAGTTGGGTTCGAAAATGATGAAGAGGAATGGCAATATGGAGCCACAGCAGATGCaGCTGACGGTGAAAAAAGTAGTGGATCTCTGTCAGGCTCTGATGAGTTAAGAAACTCACTGAAGCCAGAGACATGGAAAAGCTGGATTGTCCAGAAGGATGGTTCTCCAGACACAGATTTTGAagTTGCTGAAATTGCTCCCATTGAAACTGGAAAAGAAGGGGCAAGTGGTGTTTCGGGAAATGATTCACTTGCAGTAAGAAAGTTCACTGGTGAACATacaaacagagaaaaagaattagatCCTTCTGATGGAAAGGCAAATCACAGTGCAATAAAAAGCCGCATTGAGGAGCTGGATATGGAGCTATCCTTTATTCTTCGCTCATTGAGGACTAGGGCTGACTTGGTTGCAATATACGCGGGCCAGGGAAGCTCCTCTGATGATCTACGAAACATTGCTAATACTTGGGAATTCCTGGAAAACGTGATCATGAAGTCTCAGGACAGACTGCGTTCTGTACGTGCCAAGTTGGCAGTAGTAGAAGGAAAAATGGCACTGGCAAAAATTGATGCACAAAAGATGGAGGAAGAGACGCAGAAGATGATTGCATCACCAAAGATGGTGGAACAGAAGCAGAAGATAATTGCATCAAAACTTCGTGATACTTGTATATTTTGGCCTATCACAGCCTCTGAGGTGCTTTTAGTGGGATCATTTGACGGTTGGTCCAACCAGAGAAAGATGGAGGAGTCAGACCCTGGTGTCTTTTCTCTGTCCCTGAAGTTGTATCCTGGAAAATATGAGattAAGTTCATCGTTGATGGTGAATGGAGGACTGATCCCTTACGCCCTATTGTTCGAAACAACGGTCACGTAAATAATCTCCTCATTGTCGAATG 1529 0.4284 MPEPSSVYSVFSQFSLAELKSPLFPSVFFAVDSRRQRMPQQFASLNFVAVKQNGLLLGCSDSPKKGKSCKGLHWDYSGFLRRCKDLDSEEDFYLEPEILEFMKNSENPEAFPTERELVAAGRMDLLAAIIKKGYWPCLGWNLDEEGLEEMSIESEENEILGSGADASSCNSSASLSQQAMSSDESIELNVEESGIEGTLNRLEKDRNSILGVGFENDEEEWQYGATADAADGEKSSGSLSGSDELRNSLKPETWKSWIVQKDGSPDTDFEVAEIAPIETGKEGASGVSGNDSLAVRKFTGEHTNREKELDPSDGKANHSAIKSRIEELDMELSFILRSLRTRADLVAIYAGQGSSSDDLRNIANTWEFLENVIMKSQDRLRSVRAKLAVVEGKMALAKIDAQKMEEETQKMIASPKMVEQKQKIIASKLRDTCIFWPITASEVLLVGSFDGWSNQRKMEESDPGVFSLSLKLYPGKYEIKFIVDGEWRTDPLRPIVRNNGHVNNLLIVE 509
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01047 509 PANTHER PROTEIN PTST HOMOLOG 2, CHLOROPLASTIC 8 508 - -
Bva11g01047 509 SUPERFAMILY E set domains 430 508 IPR014756 -
Bva11g01047 509 Coils Coil 387 407 - -
Bva11g01047 509 Pfam Glycogen recognition site of AMP-activated protein kinase 432 508 IPR032640 -
Bva11g01047 509 PANTHER PROTEIN PTST HOMOLOG 3, CHLOROPLASTIC 8 508 - -
Bva11g01047 509 CDD E_set_AMPKbeta_like_N 432 508 - -
Bva11g01047 509 MobiDBLite consensus disorder prediction 162 186 - -
Bva11g01047 509 MobiDBLite consensus disorder prediction 227 246 - -
Bva11g01047 509 Gene3D Immunoglobulins 429 509 IPR013783 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01047 Bva-Chr11 12010183 12014283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01047 442 508 Protein tyrosine phosphatase (PTP) family AT3G01510 37.681 9.17e-07 49.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01047 - - jre:108981628 402.134
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01047 11 12010183 12014283 Bva11g01047 11 12010183 12014283 ECH