Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01046 ATGAGTCGCAAGCGAGAGAAACCCTACTTTTCCCGCCACTCCCCATCCCTTGCCGCCAAGAGGCGTCGTCCTTTGCCTCCGTTACCCTCTGTCGGTGAAGCCGGTGAGAAGCAGAAAACAATGCCAGCGCCACCGTCCGCGGTGGTTGTCATGGGTCTTCCTTTAGACTGTTCCGTCCTCGATCTCAAGTCCCGATTCGAGATCTATGGTGCCATCTCCCGCATCCGCATCGATGGTGATGGGGTTGGCTACATTACTTTTCGGGCCAAGGAATCTGCCGACGGCGCCATTGCTGCTGCCCTTGACCCATCGTTTGGAATCACAGTAAACTCGAAAAAGGTCCAGATGTTGTGGGCAACTGATCCTCTGGCCGTGTGGAGGGAAGGAATTGGCAATAATAAGGATAAAGGGTCTACTATGTCAAAGCTTGTGCGTGCTGAGGTACCTCTGAGTAGACATGGAAGAGGTAATAAACTTGCTTCAGCTGTAGTGAATTCCAAAACTAGGGAGGGTAGTTTAGGAAGCTTAACGCTGGACACGCCTTTCAGGGGCAGAGAAATTATTGCTTATGATGATATCCTGTA 584 0.5137 MSRKREKPYFSRHSPSLAAKRRRPLPPLPSVGEAGEKQKTMPAPPSAVVVMGLPLDCSVLDLKSRFEIYGAISRIRIDGDGVGYITFRAKESADGAIAAALDPSFGITVNSKKVQMLWATDPLAVWREGIGNNKDKGSTMSKLVRAEVPLSRHGRGNKLASAVVNSKTREGSLGSLTLDTPFRGREIIAYDDIL 194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01046 194 CDD RRM_SF 48 99 - -
Bva11g01046 194 SUPERFAMILY RNA-binding domain, RBD 40 99 IPR035979 GO:0003676
Bva11g01046 194 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 48 99 IPR000504 GO:0003723
Bva11g01046 194 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 46 121 IPR000504 GO:0003723
Bva11g01046 194 MobiDBLite consensus disorder prediction 1 43 - -
Bva11g01046 194 SMART rrm1_1 47 117 IPR000504 GO:0003723
Bva11g01046 194 Gene3D - 31 120 IPR012677 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01046 Bva-Chr11 12008168 12009715 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01046 1 194 Homeobox Transcription Factor Family AT1G27050 50.244 7.48e-63 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01046 - - gmx:106797175 265.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01046 11 12008168 12009715 Bva11g01046 11 12008168 12009715 ECH