Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01044 ATGGCGAGTGGCCAAGTTTATGGTGCTTCAAACATGACCGTTTTGCTCCAAAACGACAGGCTTCCTTGCTCCTCTGAAGTTCTCGAGTCTCTCTGGGTTCACCCCTCTGACCCTTCTTTTCACCAAGGTTCAAAAACTCTGGTTGATTTTGAGAATGCTAGCAACAATCCAAACAGGGCTTTCTTCCAAAAGcttgaaaaggaagaaaacgtGGATGAAGATTATGATGCGTGCTTTCACCAACAAGGGAAGAAGAGGCGGCTCACAAGCGAACAAGTTCAGTTCCTTGAAAGGAACTTCGAGGTAGAAAACAAGCTTGAACCCGAAAGAAAAGTCCAATTTGCTAAAGAGCTTGGCTTGCAGCCTAGGCAAGTAGCAATATGGTTCCAAAACCGAAGAGCTCGGTTCAAGACCAAGCAACTCGAGAAAGACTATGGCACCTTGAAGGCCAGCTTTGACAAGCTCAAAAGCGACTTTGACAATCTCTTCCACGAGAACGAAAAGCTAAAACAAGAgGTGAATTCCCTCAAGGACAGGTTGAGTgctagagagaaagagaaagagaaagattctAACTGTGATAAGCCTTCATCTCCTGACAAAGAGGCTCTGGATTTGATCTCAAATGCAGTTTCTGAAAACGGGTGCAAAGTGGAAATGGTGATTTGCAAACAGGAAGATGCCAATTCAGCCAAAAGCGATGTGTTTGATTCAGATAGCCCACATTACACCGATGGCAACCATTCAACCTCATTATTCTTGGAGCCTGCAAATTCCTCTCATGCTTTTGAACCAGACCACTCTGATTTCTCACAAGACGAAGAAGATAACCAAAGTGACAAGCTTTTGAACCTCCCTTGCCTGCCAAAGGTTGAAGATTGCTGCTATGATCATGATGACCCACCTCACAATTCTTGTCATTTTGGGTTCCTAGTTGAAGATCAAGCCTTCTCTTTTTGGCCTTACTG 968 0.4225 MASGQVYGASNMTVLLQNDRLPCSSEVLESLWVHPSDPSFHQGSKTLVDFENASNNPNRAFFQKLEKEENVDEDYDACFHQQGKKRRLTSEQVQFLERNFEVENKLEPERKVQFAKELGLQPRQVAIWFQNRRARFKTKQLEKDYGTLKASFDKLKSDFDNLFHENEKLKQEVNSLKDRLSAREKEKEKDSNCDKPSSPDKEALDLISNAVSENGCKVEMVICKQEDANSAKSDVFDSDSPHYTDGNHSTSLFLEPANSSHAFEPDHSDFSQDEEDNQSDKLLNLPCLPKVEDCCYDHDDPPHNSCHFGFLVEDQAFSFWPY 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01044 322 Coils Coil 152 186 - -
Bva11g01044 322 CDD homeodomain 84 140 IPR001356 GO:0003677
Bva11g01044 322 MobiDBLite consensus disorder prediction 182 201 - -
Bva11g01044 322 Gene3D - 65 139 - -
Bva11g01044 322 Pfam Homeodomain 84 137 IPR001356 GO:0003677
Bva11g01044 322 SMART HOX_1 82 143 IPR001356 GO:0003677
Bva11g01044 322 ProSiteProfiles 'Homeobox' domain profile. 79 139 IPR001356 GO:0003677
Bva11g01044 322 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 1 322 IPR045224 GO:0003700
Bva11g01044 322 ProSitePatterns 'Homeobox' domain signature. 114 137 IPR017970 GO:0000981|GO:0006355
Bva11g01044 322 PANTHER HOMEOBOX LEUCINE ZIPPER FAMILY PROTEIN 1 322 - -
Bva11g01044 322 Gene3D - 140 182 - -
Bva11g01044 322 Pfam Homeobox associated leucine zipper 139 180 IPR003106 GO:0006355|GO:0043565
Bva11g01044 322 SUPERFAMILY Homeodomain-like 74 141 IPR009057 -
Bva11g01044 322 MobiDBLite consensus disorder prediction 182 202 - -
Bva11g01044 322 PRINTS Lambda-repressor HTH signature 119 135 IPR000047 GO:0003677
Bva11g01044 322 PRINTS Lambda-repressor HTH signature 110 119 IPR000047 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01044 Bva-Chr11 11999236 12001192 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01044 43 245 Homeobox Transcription Factor Family AT3G01470 42.718 5.32e-43 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bva11g01044 Homeodomain 8e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01044 - K09338 zju:107428804 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01044 11 11999236 12001192 Bva11g01044 11 11999236 12001192 ECH