Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva11g01040 | ATGGAATCGCAGTTGGGATTGATAGACCAATCATTCAGTAACTGGTACTCGAGCTACGTCCACGAAGCACTCGACGAATtgccttataattttactatcaCCGACCCCTCCATTTCTGGCCACCCAATTGTTTTTGCAAGCCGTGGCTTCCTGAAAATGTCGGGGTATTCTAAAGACGAGGTGGTTGGTAAGAATGGGAGGATTTTTCAAGGACCGGACACCTGTAGAAGATCAATAATGGAAATTCGAGAGGCGATAAGGGAAGAGAGAACCATtcagataaattttttgaattatcgTAAAGATGGGACACCCTTTTGGATGCTATTTCATATGAGCCCTGTCTTTAGCAAGGATGATGGGAGGGTGACCCACTACGTCGCAGTTCAGGTACCAATATCGAAAAAACGGAGGAGTACTGGTTGTGGGTATGGAAGAATTGGAGTTAGTTTGTCTGAGGATGGCTCTCAAGTGCaggattttgtttttgggtcTTGTAGGAAGGAAGTGTGCTCGGATTCTTTGCTGGAACTGGGTCGTGTTTTGTCCCTGCAACAAGTTTTGGAACATGATATTAGAGAATCAGTGTCTGAAGAGCCATGCGAGGCAAGTGATGTTGAGAAGATAAAATCTATGACTGCCATGGACGACATCTTTTCTTTGCTGACTCACTACAGCGAGTCAACTGGCAGATTGGTGTGTCGAAAGAGATGTAGCATCCCTGACGTCGATCTTCTTAGCTCATCCTTGATTATTTCTCTTGGTAGAATCAAACACAGCTTTGTATTAACTAATCCGCACTTACCTGACATGCCCATTGTGTACGCCAGTGATGCCTTCTTGAAATTGACAGGTTATGCAAGGGACGAAGTGTTGGGGCGCAATTGTAGATTTTTAAGTGGAGCGAGTACTGATACTTCAACTTTATGCCTGATAAGGGAAAGCATTAAAACTGAACAACCATGCACAGTACGTATTTTGAATTACAGGAAGGATGAAAGCTCTTTTTGGAATCTTCTTCACATATCACCTGTTCGTGATGCTTACGGCAAGATAGCATACTTTGTGGGAGTTCAAATAGAAGACTCTAATGGTAAGACGCTGGAGAGACAGGGATTGAGCCCAGAGAAGAGGCTGCTAAGCGTGGTTGGTTCAGTCAAGATTGCAGTGAGGAGTTCATCAATGAGTAATGCTGGATCTTCAAAGTCATA | 1211 | 0.4211 | MESQLGLIDQSFSNWYSSYVHEALDELPYNFTITDPSISGHPIVFASRGFLKMSGYSKDEVVGKNGRIFQGPDTCRRSIMEIREAIREERTIQINFLNYRKDGTPFWMLFHMSPVFSKDDGRVTHYVAVQVPISKKRRSTGCGYGRIGVSLSEDGSQVQDFVFGSCRKEVCSDSLLELGRVLSLQQVLEHDIRESVSEEPCEASDVEKIKSMTAMDDIFSLLTHYSESTGRLVCRKRCSIPDVDLLSSSLIISLGRIKHSFVLTNPHLPDMPIVYASDAFLKLTGYARDEVLGRNCRFLSGASTDTSTLCLIRESIKTEQPCTVRILNYRKDESSFWNLLHISPVRDAYGKIAYFVGVQIEDSNGKTLERQGLSPEKRLLSVVGSVKIAVRSSSMSNAGSSKS | 403 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva11g01040 | 403 | PANTHER | PROTEIN TWIN LOV 1 | 8 | 399 | - | - | |
Bva11g01040 | 403 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 32 | 130 | IPR035965 | - | |
Bva11g01040 | 403 | Pfam | PAS domain | 260 | 359 | IPR000014 | - | |
Bva11g01040 | 403 | Pfam | PAS domain | 41 | 134 | IPR000014 | - | |
Bva11g01040 | 403 | PANTHER | PROTEIN TWIN LOV 1 | 8 | 399 | - | - | |
Bva11g01040 | 403 | ProSiteProfiles | PAC domain profile. | 90 | 145 | IPR000700 | - | |
Bva11g01040 | 403 | Gene3D | PAS domain | 260 | 401 | - | - | |
Bva11g01040 | 403 | Gene3D | PAS domain | 30 | 147 | - | - | |
Bva11g01040 | 403 | ProSiteProfiles | PAS repeat profile. | 273 | 295 | IPR000014 | - | |
Bva11g01040 | 403 | CDD | PAS | 43 | 133 | IPR000014 | - | |
Bva11g01040 | 403 | SMART | pac_2 | 323 | 363 | IPR001610 | - | |
Bva11g01040 | 403 | SMART | pac_2 | 93 | 136 | IPR001610 | - | |
Bva11g01040 | 403 | TIGRFAM | sensory_box: PAS domain S-box protein | 273 | 361 | IPR000014 | - | |
Bva11g01040 | 403 | TIGRFAM | sensory_box: PAS domain S-box protein | 43 | 137 | IPR000014 | - | |
Bva11g01040 | 403 | SUPERFAMILY | PYP-like sensor domain (PAS domain) | 265 | 359 | IPR035965 | - | |
Bva11g01040 | 403 | CDD | PAS | 269 | 358 | IPR000014 | - | |
Bva11g01040 | 403 | ProSiteProfiles | PAS repeat profile. | 16 | 89 | IPR000014 | - | |
Bva11g01040 | 403 | ProSiteProfiles | PAC domain profile. | 320 | 374 | IPR000700 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva11g01040 | Bva-Chr11 | 11967449 | 11971533 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva11g01040 | 17 | 398 | AGC Kinase Gene Family | AT5G58140 | 32.394 | 5.26e-62 | 213 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva11g01040 | - | - | csin:114286684 | 526.554 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva11g01040 | 11 | 11967449 | 11971533 | Bva11g01040 | 11 | 11967449 | 11971533 | ECH |