Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01038 ATGGGGTTGGGTGCTGAGAATGGTAAGGTGGTGGAGTCTTGGGATGAGTGCAAAtcaaaaggaaggaagaagaagaagaaagatgatgGGATTGTGGAAGAGGAAGGGACTGGGTGTTGGTTTAGACTGAGATTCATTGGAAGCTGCATTTCTTCGAGATCCAAGGTTGATAGCTCAGTTAGCGGTACCAGCACTCATTTTGCTGAAAGTAAATCTACTAATGATACAAGTAGAGACCAACCTGTAGCCCCAGTAGTCTCATCTACAACCACTAGTAATGCAGAAAGCAATTCATCCACATCCAAACTTGAAGAGGAACTTAAAGTTGCTTCCAGGCTGCggaaattttcattcaatgaTCTTAAATTGGCAACGAGAAATTTTCGTCctgagagtcttctaggtgaAGGTGGGTTTGGCTGTGTATTCAAGGGATGgattgaagaaaatggaacTGCTCCAGTGAAACCTGGCACAGGGCTCACTGTTGCTGTTAAAACCCTCAACCATGATGGGCTTCAGGGTCATAAAGAATGGCTGGCTGAAGTAAATTTTCTTGGTGATCTAGTTCATCCAAACCTTGTTAAGCTTATAGGCTACTGTATTGAAGATAATCAAAGGTTGCTAGTGTACGAATTTATGCCTCGGGGGAGCCTAGAAAACCACCTTTTCAGGAGATCCCTGCCTCTTCCATGGTCCATTAGGATGAAAATTGCTCTGGGAGCAGCAAAGGGGCTTGCCTTTCTTCACGAGGAAGCAGAGCGGCCAGTTATATATAGGGATTTTAAAACTTCCAATATACTATTAGATGCAGACTATAATGCCAAGCTATCGGATTTTGGACTTGCCAAAGATGGCCCTGAGGGTGATAAAACTCATGTATCTACTAGGGTGATGGGAACTTACGGTTATGCAGCGCCAGAATATGTCATGACTGGACATCTTACATCCAGAAGTGACGTGTACAGTTTCGGAGTGGTACTACTTGAGATGTTATCTGGAAGAAGATCAATGGACAAAAGCAGACCTAATGGCGAACATAACCTTGTGGAATGGGCTCGACCACATCTAGTAGAAAGAAGGAGGTTCTACAGATTGATAGACCCTCGGCTTGAAGGTCACTTCTCTATAAAAGGAGCTCAAAAAGCTGCCCAATTGGCTGCTCACTGCCTTAGCAGAGATCCAAAAGCCAGACCACTAATGAGTGAAGTTGTAGAAGCTTTAAAGCCTTTGCCAAATCTTAAAGACATGGCAAGTTCctcatattattttcaaacaatGCAAGCCGACCGCTTCGGAGCAAGCCCCAATACTAGAAATGGTCGAACACAAGGAGCATTACTCACCAGGAATGGGCAGCACAGGAGCCTTTCCATACCAAATGGTACTCATGCTTCTCCGTATCACCACCAGTTTCCCCAACAATCACCTAAACCCAACGGCAAAGCATA 1451 0.417 MGLGAENGKVVESWDECKSKGRKKKKKDDGIVEEEGTGCWFRLRFIGSCISSRSKVDSSVSGTSTHFAESKSTNDTSRDQPVAPVVSSTTTSNAESNSSTSKLEEELKVASRLRKFSFNDLKLATRNFRPESLLGEGGFGCVFKGWIEENGTAPVKPGTGLTVAVKTLNHDGLQGHKEWLAEVNFLGDLVHPNLVKLIGYCIEDNQRLLVYEFMPRGSLENHLFRRSLPLPWSIRMKIALGAAKGLAFLHEEAERPVIYRDFKTSNILLDADYNAKLSDFGLAKDGPEGDKTHVSTRVMGTYGYAAPEYVMTGHLTSRSDVYSFGVVLLEMLSGRRSMDKSRPNGEHNLVEWARPHLVERRRFYRLIDPRLEGHFSIKGAQKAAQLAAHCLSRDPKARPLMSEVVEALKPLPNLKDMASSSYYFQTMQADRFGASPNTRNGRTQGALLTRNGQHRSLSIPNGTHASPYHHQFPQQSPKPNGKA 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01038 483 MobiDBLite consensus disorder prediction 11 29 - -
Bva11g01038 483 PANTHER KINASE APK1B, CHLOROPLAST, PUTATIVE-RELATED 60 473 - -
Bva11g01038 483 Gene3D Transferase(Phosphotransferase) domain 1 214 429 - -
Bva11g01038 483 CDD STKc_IRAK 134 411 - -
Bva11g01038 483 SUPERFAMILY Protein kinase-like (PK-like) 106 408 IPR011009 -
Bva11g01038 483 ProSiteProfiles Protein kinase domain profile. 128 414 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01038 483 PANTHER OS01G0588500 PROTEIN-RELATED 60 473 - -
Bva11g01038 483 MobiDBLite consensus disorder prediction 54 100 - -
Bva11g01038 483 Pfam Protein tyrosine and serine/threonine kinase 132 408 IPR001245 GO:0004672|GO:0006468
Bva11g01038 483 MobiDBLite consensus disorder prediction 54 103 - -
Bva11g01038 483 MobiDBLite consensus disorder prediction 454 483 - -
Bva11g01038 483 ProSitePatterns Protein kinases ATP-binding region signature. 134 166 IPR017441 GO:0005524
Bva11g01038 483 Gene3D Phosphorylase Kinase; domain 1 87 213 - -
Bva11g01038 483 MobiDBLite consensus disorder prediction 1 29 - -
Bva11g01038 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 257 269 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01038 Bva-Chr11 11952092 11956029 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01038 75 408 Glycoside Hydrolase AT3G07070 53.254 1.61e-116 347
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva11g01038 PK_Tyr_Ser-Thr 4.6e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01038 - - gmx:100807510 867.07
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01038 11 11952092 11956029 Bva11g01038 11 11952092 11956029 ECH