Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01028 ATGATGCAGCTACACTTgccatcttcttcttccccgTTCACTGCACAATACTGCATCAAAGTCTGCCCTAACAACTGTCTCTCTTCAAAGTTCTTACCTTTAAGCAGTGCTTCTAAGCCCAGTTCCTCAAGCTTCTCTCTGACCCTGCCAACCTTCAGCACCAGGAGACTCGTTATCAAATGCCGCCAATCCGAGTTCTTCGACCAGAATAGCTTCTCGTCTAGAGCTGATTCCGAAGATTCTTCATTTTACCCGCGGTATTCCTCAGCTCCAAGCGatggaagaggaagagaggaagTTGGTGCTTTGCCGCCGAGGGTTTTTGTGGGTCACTCGATATATAAAGGGAAGGCTGCTCTTACAGTGACTCCTAGACCTCCAGGATTCGCCCCATTGGATTCTGGGGCGTTCAAAGTGTCTAGGGAGGGTTATGTGCTGCTTCAGTTTGCTCCTGCAGTTGGTATGCGCCAGTACGACTGGAATAGAAAGCAGGTATTCTCTCTATCAGTAAGTGAAATGGGAAGCATTATTAGCCTTGGTGCCAGGGGTTCTTGTGAGTTTTTCCACGATccttttaaaggaaaaagTGACGAAGGTCAAGTCCGAAAAGTTTTGAAGGTGGAGCCACTTCCGGATGATTCTGGTCACTTCTTTAACCTCAGTGTTCAAAACAAGCTTGTGAACGTGGACGAAAGCATCTATATCCCAGTTACAAAATCAGAATTGGCAGTTTTCAACTCAATTTTCAACTTCATCATGCCCTACCTTCTGGGTTGGCATGCCTTTGCCAATACCATAGAGCCGAAAGATCTGGGCCGAACAAATAATGCCAACCCAAGATATGGAGCAGACTATGAATGGAGCAGATACTA 872 0.4346 MMQLHLPSSSSPFTAQYCIKVCPNNCLSSKFLPLSSASKPSSSSFSLTLPTFSTRRLVIKCRQSEFFDQNSFSSRADSEDSSFYPRYSSAPSDGRGREEVGALPPRVFVGHSIYKGKAALTVTPRPPGFAPLDSGAFKVSREGYVLLQFAPAVGMRQYDWNRKQVFSLSVSEMGSIISLGARGSCEFFHDPFKGKSDEGQVRKVLKVEPLPDDSGHFFNLSVQNKLVNVDESIYIPVTKSELAVFNSIFNFIMPYLLGWHAFANTIEPKDLGRTNNANPRYGADYEWSRY 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01028 290 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY2, MITOCHONDRIAL 26 289 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bva11g01028 290 PANTHER SINGLE-STRANDED DNA-BINDING PROTEIN WHY1, CHLOROPLASTIC 26 289 - -
Bva11g01028 290 Pfam Whirly transcription factor 113 247 IPR013742 GO:0003697|GO:0006355|GO:0006952
Bva11g01028 290 SUPERFAMILY ssDNA-binding transcriptional regulator domain 105 289 IPR009044 GO:0003677|GO:0006355
Bva11g01028 290 Gene3D Transcriptional Coactivator Pc4; Chain A 98 270 IPR009044 GO:0003677|GO:0006355
Bva11g01028 290 MobiDBLite consensus disorder prediction 73 99 - -
Bva11g01028 290 MobiDBLite consensus disorder prediction 73 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01028 Bva-Chr11 11900361 11903472 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01028 45 289 Whirly Transcription Factor Family AT1G14410 62.857 6.20e-112 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Whirly Bva11g01028 Whirly 5.4e-60 CL0609
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01028 - - mesc:110608495 346.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01028 11 11900361 11903472 Bva11g01028 11 11900361 11903472 ECH