Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01024 ATGGGAAAAACACCTGGAAAGTGGATCAAGAGTTTACTTTCGGGGAAGAAATCatcaaaatctaatttatcaaaaaagagTGATTTTTCTGATGTATCTGTGTCTGCTCCAACTGTTAACTCTTCACTGATAACTGCGCCCATTTCTGGAGCCAATCTAACTAAAGAAGCCTTTTTGGACATAGTTAGTGGACCATCAAATGACAACGTTATTCTTTCAGCTGGGGATGAAGAAGCCAATGTACAAGCagttgttaatttttgttcacAGGATgatattgagaaaattaagCTTACAGAAGCTGCTATAAAAGTTCAAGCTTCTTTGAGAGGCAATCTGGCTCGTCGAGAATTTCAAATGCTTAAAGCTATCACACAGCTGCAATCTCTTATTCGTGCTCACTTGGTTAGAAGACAAGCTGTTTCTACGTTGTACTGTGTGAAGGGAATAGTTAAGTTTCAAGCATTGGCTCGTGGTTACAAGGTTAGGTGTTCTAAAATTGGCCTTGCAGGTAATAAATACTCAAATTCTATTAGAGTAGTTGCAACTACACAGGTAGAGAAGCTGTCAGAAAGTGTCTTTGTTCGCAAGCTTCTGGTTTCATTGTCCTCTTCAGTTCCTCTACATCTCAAATATGATCCTGGAGAACCTAACTCGGCGTGGAAGTGGCTTGACTGTTGGACAAGGTCACACTTTTGGGCACCTCTTCCTGAATCAAAATTGGTGTCTGATGAAAAGAAGAGCAGTTGTCAAACAGTCGAAAAGGATAAGGgtaaagcaaaaagaaatgcaCGGAAAGTTTCTAAAGTGAAAGTTGAAAATGGTTCATTCTCAGATTCTAACAAATATAAACGACATCTGGAAAAGGTTTCAAGCCACACATTGCAACCTGCTCAGGAAAATttacaaaaggaaattgagAAGCATAACTTTAAAAGAACTTCTGTGCAGAATGTTTCAGATAGATATGAGGTTTCTagtgagaaaataaaacacattacAGGAAAAGTTTCCGGTAATAGTATTTTCGATGTTGCAGAGCAGGACCCAAGTGCTTCTGccgagaaaaagaaagatgtgGCAGGGTCAAAATCGAAAAAGTCTGATATTGAAAAAAGTCTTGGAAAGCAAGCAGAAAATGAGAATGATAATGAACTACATGATAATCCTATGGCTAACTTGCAAACTGGTCTAAACAATGGTTCAGGTGAAGGTATTAAAGGAACCGCCGAGGACTTCAACTCTGGTGACAACTGTGTTAGCGATGTTAAAACTAAGAGCAGCCTGAGAAGAGCTTCATTACCTGGAAAGTTTGATGATCAAGACAATGGGGTACATAACTCTCCAAAACTGCCCAGCTATATGGCACCTACTGAATCTGCAAAAGCTAAGCTAAGAGCACAAGGCTCTCCCAAGTGTGCTAACTTcttgatagaaaaaaaata 1445 0.3599 MGKTPGKWIKSLLSGKKSSKSNLSKKSDFSDVSVSAPTVNSSLITAPISGANLTKEAFLDIVSGPSNDNVILSAGDEEANVQAVVNFCSQDDIEKIKLTEAAIKVQASLRGNLARREFQMLKAITQLQSLIRAHLVRRQAVSTLYCVKGIVKFQALARGYKVRCSKIGLAGNKYSNSIRVVATTQVEKLSESVFVRKLLVSLSSSVPLHLKYDPGEPNSAWKWLDCWTRSHFWAPLPESKLVSDEKKSSCQTVEKDKGKAKRNARKVSKVKVENGSFSDSNKYKRHLEKVSSHTLQPAQENLQKEIEKHNFKRTSVQNVSDRYEVSSEKIKHITGKVSGNSIFDVAEQDPSASAEKKKDVAGSKSKKSDIEKSLGKQAENENDNELHDNPMANLQTGLNNGSGEGIKGTAEDFNSGDNCVSDVKTKSSLRRASLPGKFDDQDNGVHNSPKLPSYMAPTESAKAKLRAQGSPKCANFLIEKK 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01024 481 MobiDBLite consensus disorder prediction 350 386 - -
Bva11g01024 481 PANTHER IQ-DOMAIN 5-RELATED 2 472 - -
Bva11g01024 481 PANTHER IQ CALMODULIN-BINDING MOTIF PROTEIN 2 472 - -
Bva11g01024 481 SMART iq_5 97 119 IPR000048 GO:0005515
Bva11g01024 481 SMART iq_5 145 167 IPR000048 GO:0005515
Bva11g01024 481 SMART iq_5 120 141 IPR000048 GO:0005515
Bva11g01024 481 MobiDBLite consensus disorder prediction 414 428 - -
Bva11g01024 481 MobiDBLite consensus disorder prediction 348 453 - -
Bva11g01024 481 ProSiteProfiles IQ motif profile. 120 149 IPR000048 GO:0005515
Bva11g01024 481 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 94 164 IPR027417 -
Bva11g01024 481 Pfam Protein of unknown function (DUF4005) 441 473 IPR025064 -
Bva11g01024 481 Gene3D - 95 145 - -
Bva11g01024 481 Pfam IQ calmodulin-binding motif 122 139 IPR000048 GO:0005515
Bva11g01024 481 Pfam IQ calmodulin-binding motif 99 119 IPR000048 GO:0005515
Bva11g01024 481 Pfam IQ calmodulin-binding motif 148 164 IPR000048 GO:0005515
Bva11g01024 481 MobiDBLite consensus disorder prediction 387 403 - -
Bva11g01024 481 ProSiteProfiles IQ motif profile. 98 126 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01024 Bva-Chr11 11882160 11885324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01024 1 479 IQD Protein Family AT1G14380 34.191 8.81e-64 215
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01024 - - gmx:100800548 445.277
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01455 08 7616687 7622876 Bva11g01024 11 11882160 11885324 BWGD
Bva11g01024 11 11882160 11885324 Bva11g01024 11 11882160 11885324 ECH
Bva11g01024 11 11882160 11885324 Bva06g01247 06 9590072 9595229 ECH
Bva11g01024 11 11882160 11885324 Bva05g00456 05 2249559 2254823 ECH