Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01022 ATGTGGTGGTGTTTGGGTTGGACCACTGGAAAAATCCCATTGACATCAGCAAGTCCACGAGGAAAAGACGCAAAACATGGAAGACCTGGTTTACTAACTCAGCAGAAGAATCTGATTATTGTTTCGAACAAACTAAGAGGAAATCGTGGCAGAGATGCAAGTCTTGGTTACATACCTACACCGAGAGATTGGAATGTTCTGAAGATGGATAAGCATACAATGCCGCAAATTTGGAAGCTCAAGCAGTTTCCGCATAAAGTGTTGAAGGATGCAACTCGCAATTTCAACAAGAAGAATTTGATCGGGCAAGGCGGCTCCGGCGATGTTTACAAAGGATATCTCCCTAAGTACAGCATGTATGCTGCAACAAAACCACAAGAACGATTCCCTATTGCTGTTAAGAGAATCAGAAGGCTAGGAGCCCAAGGACATGAAGAATGGCTGAATGAATTGAGGTATTTGAGTTTGATAAGCCACCCAAATGTGGTGAATCTCATAGGGTACTGCTCCCAGGGCAAGCATAGAATGCTGGTCTATGAGCACATGAATGGAGGAAGCTTGGAGGACCATCTTCTGGCAGAAGACAACCAGTCATCCATCGTGATGTTAAATCTTCCAATGTCCTGCTTGATGCTTCCTTCAATCCCAAGCTCTCAAGACTTTGGACTAGCTAGATATGGACCTGAAGGGGACCAATCCCATGTATCATCAAGAATTCTTGGCACCAGAGGCTATTTTGCTCCAGAGTACATAGCCACAGGGCATTTGTCACTAAAAGCTGATGTATACAGCTTTGGGGTGGTTCTGCTGCAGATTTTGTGTGGCTGTGGTGCAGTTAGGAAATGTTCAGATGGAATGAAAGGGAACCTTGCTCAGTGGGCTAAACCATATCTTAGCAACACACTGGAACTGCACCGTGTAATTGACAAGAGACAAGGACACGGTTTTCAACTGAAAGAAGCCTGTGAGTTTGCTGAAATAACAGACTGTTGCCTCTGTTCAAATCCCAAGAAGCGACCAACAATGGCTCAAGTTGTGGCTTGTTTGGAGAAAGTAGAGCAAAAACTGGAATTACATAATCAAAAATCATA 1091 0.44 MWWCLGWTTGKIPLTSASPRGKDAKHGRPGLLTQQKNLIIVSNKLRGNRGRDASLGYIPTPRDWNVLKMDKHTMPQIWKLKQFPHKVLKDATRNFNKKNLIGQGGSGDVYKGYLPKYSMYAATKPQERFPIAVKRIRRLGAQGHEEWLNELRYLSLISHPNVVNLIGYCSQGKHRMLVYEHMNGGSLEDHLLAEDNQSSIVMLNLPMSCLMLPSIPSSQDFGLARYGPEGDQSHVSSRILGTRGYFAPEYIATGHLSLKADVYSFGVVLLQILCGCGAVRKCSDGMKGNLAQWAKPYLSNTLELHRVIDKRQGHGFQLKEACEFAEITDCCLCSNPKKRPTMAQVVACLEKVEQKLELHNQKS 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01022 363 Pfam Protein tyrosine and serine/threonine kinase 98 197 IPR001245 GO:0004672|GO:0006468
Bva11g01022 363 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC-LIKE 36 195 - -
Bva11g01022 363 Gene3D Phosphorylase Kinase; domain 1 66 181 - -
Bva11g01022 363 PANTHER OS01G0588500 PROTEIN-RELATED 36 195 - -
Bva11g01022 363 ProSitePatterns Protein kinases ATP-binding region signature. 101 134 IPR017441 GO:0005524
Bva11g01022 363 ProSiteProfiles Protein kinase domain profile. 95 356 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bva11g01022 363 SUPERFAMILY Protein kinase-like (PK-like) 75 355 IPR011009 -
Bva11g01022 363 PANTHER OS01G0588500 PROTEIN-RELATED 219 362 - -
Bva11g01022 363 Gene3D Transferase(Phosphotransferase) domain 1 182 363 - -
Bva11g01022 363 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC-LIKE 219 362 - -
Bva11g01022 363 Pfam Protein kinase domain 220 346 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01022 Bva-Chr11 11865240 11868487 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01022 19 349 Glycoside Hydrolase AT3G07070 33.699 1.63e-54 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva11g01022 Pkinase 1.2e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01022 - - mnt:21403978 267.7