Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Bva11g01021 | ATGGGGAACTGCTTAGATTCTTCTGCAAAAGTTGATGCAGCTCAAAGTTCCAGAACCTCTGCATCTGGAATTTCAAAAACTAGTCCTTCAAGCTTATCTATTCAATCATACAGTGAGAAAAGCAGTAATTCCTCAAGTCTTCCGACACCAAGAACTGAGGGTGAAATCTTGTCTTCTCCAAATTTAAAATCCTTCACATTCAATGAGCTAAGGAATGCCACCAGAAATTTCCGACCTGACAGTCTCCTTGGAGAAGGGGGATTTGGTTGTGTTTATAAGGGATGGATTGATGCACACACGTTCACAGCTTCAAAGCCTGGATCTGGAATGGTTGTTGCTGTAAAGAAGCTCAAGCCTGAAGGTTTTCAAGGTCATAAAGAGTGGTTGACTGAAGTTCACTACTTGGGGCAACTCCACCATCGTAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGAGAGAACAGGCTATTGGTCTATGAGTTTATGCCCAAGGGGAGCTTGGAGAATCATCTGTTTAGAAGAGGACCTCAGCCACTCTCATGGTCAGTGAGGATGAAAGTAGCCATTGGTGCTGCCAAAGGGCTTGCTTTTCTTCATAATGCTCAATCCCAAGTCATATACCGTGATTTTAAAGCTTCTAATATTCTACTAGATGCTGAATTCAATGCCAAACTCTCTGATTTTGGCTTAGCCAAGGCGGGTCCTACTGGTGACAGAACTCATGTTTCTACTCAAGTCATGGGCACTCATGGATATGCAGCACCTGAATATGTTGCAACAGGTCGGTTGACAGCCAAAAGCGATGTGTACAGCTTTGGAGTTGTGTTGCTTGAACTTTTATCTGGAAGACGTGCTGTTGATAGAACAAAAGCTGGTATAGAACAGAATCTGGTAGACTGGGCAAAACCATATTTGggtgacaaaagaaaactGTTTCGCATTATGGACACCAAGTTGGAGGGCCAATACCCGCAGAAAGGAGCCTATACAGCTGCAACTCTTGCTCTACAATGCCTGAATCCTGAAGCCAAAGCAAGACCTTCAATGACAGAAGTTCTAGCAACACTTGAACAGATTGAGACCCCGAAAAATGCAGCCAAACACTCTCAAACAGAGCAGCAGCGTATAGCCCAAGTTCCTATCAGAAGGTCTCCTGCACGAAATAGGACCCCTCAAAATATGACTCCAACTGCATCCCCATTGCCATCTTACCGACAATCTCCTCGTGCACGTTA | 1238 | 0.4362 | MGNCLDSSAKVDAAQSSRTSASGISKTSPSSLSIQSYSEKSSNSSSLPTPRTEGEILSSPNLKSFTFNELRNATRNFRPDSLLGEGGFGCVYKGWIDAHTFTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVHYLGQLHHRNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAAKGLAFLHNAQSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGIEQNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNPEAKARPSMTEVLATLEQIETPKNAAKHSQTEQQRIAQVPIRRSPARNRTPQNMTPTASPLPSYRQSPRAR | 412 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Bva11g01021 | 412 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 206 | 218 | IPR008271 | GO:0004672|GO:0006468 | |
Bva11g01021 | 412 | PANTHER | PROTEIN KINASE 2B, CHLOROPLASTIC | 16 | 410 | - | - | |
Bva11g01021 | 412 | MobiDBLite | consensus disorder prediction | 386 | 412 | - | - | |
Bva11g01021 | 412 | MobiDBLite | consensus disorder prediction | 363 | 412 | - | - | |
Bva11g01021 | 412 | MobiDBLite | consensus disorder prediction | 363 | 379 | - | - | |
Bva11g01021 | 412 | MobiDBLite | consensus disorder prediction | 1 | 58 | - | - | |
Bva11g01021 | 412 | CDD | STKc_IRAK | 83 | 360 | - | - | |
Bva11g01021 | 412 | SUPERFAMILY | Protein kinase-like (PK-like) | 44 | 357 | IPR011009 | - | |
Bva11g01021 | 412 | Gene3D | Transferase(Phosphotransferase) domain 1 | 163 | 385 | - | - | |
Bva11g01021 | 412 | Gene3D | Phosphorylase Kinase; domain 1 | 53 | 162 | - | - | |
Bva11g01021 | 412 | Pfam | Protein tyrosine and serine/threonine kinase | 81 | 356 | IPR001245 | GO:0004672|GO:0006468 | |
Bva11g01021 | 412 | ProSitePatterns | Protein kinases ATP-binding region signature. | 83 | 116 | IPR017441 | GO:0005524 | |
Bva11g01021 | 412 | MobiDBLite | consensus disorder prediction | 9 | 58 | - | - | |
Bva11g01021 | 412 | PANTHER | OS01G0588500 PROTEIN-RELATED | 16 | 410 | - | - | |
Bva11g01021 | 412 | ProSiteProfiles | Protein kinase domain profile. | 77 | 360 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Bva11g01021 | Bva-Chr11 | 11862351 | 11865078 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Bva11g01021 | 53 | 357 | Glycoside Hydrolase | AT3G07070 | 53.247 | 1.04e-113 | 337 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_RLCK-VIIa-2 | Bva11g01021 | PK_Tyr_Ser-Thr | 2.3e-47 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Bva11g01021 | - | - | gmx:100809778 | 709.138 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Bva08g01457 | 08 | 7643106 | 7646247 | Bva11g01021 | 11 | 11862351 | 11865078 | BWGD | |
Bva11g01021 | 11 | 11862351 | 11865078 | Bva11g01021 | 11 | 11862351 | 11865078 | ECH |