Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01021 ATGGGGAACTGCTTAGATTCTTCTGCAAAAGTTGATGCAGCTCAAAGTTCCAGAACCTCTGCATCTGGAATTTCAAAAACTAGTCCTTCAAGCTTATCTATTCAATCATACAGTGAGAAAAGCAGTAATTCCTCAAGTCTTCCGACACCAAGAACTGAGGGTGAAATCTTGTCTTCTCCAAATTTAAAATCCTTCACATTCAATGAGCTAAGGAATGCCACCAGAAATTTCCGACCTGACAGTCTCCTTGGAGAAGGGGGATTTGGTTGTGTTTATAAGGGATGGATTGATGCACACACGTTCACAGCTTCAAAGCCTGGATCTGGAATGGTTGTTGCTGTAAAGAAGCTCAAGCCTGAAGGTTTTCAAGGTCATAAAGAGTGGTTGACTGAAGTTCACTACTTGGGGCAACTCCACCATCGTAATCTGGTTAAATTAATTGGGTACTGCTTGGAGGGAGAGAACAGGCTATTGGTCTATGAGTTTATGCCCAAGGGGAGCTTGGAGAATCATCTGTTTAGAAGAGGACCTCAGCCACTCTCATGGTCAGTGAGGATGAAAGTAGCCATTGGTGCTGCCAAAGGGCTTGCTTTTCTTCATAATGCTCAATCCCAAGTCATATACCGTGATTTTAAAGCTTCTAATATTCTACTAGATGCTGAATTCAATGCCAAACTCTCTGATTTTGGCTTAGCCAAGGCGGGTCCTACTGGTGACAGAACTCATGTTTCTACTCAAGTCATGGGCACTCATGGATATGCAGCACCTGAATATGTTGCAACAGGTCGGTTGACAGCCAAAAGCGATGTGTACAGCTTTGGAGTTGTGTTGCTTGAACTTTTATCTGGAAGACGTGCTGTTGATAGAACAAAAGCTGGTATAGAACAGAATCTGGTAGACTGGGCAAAACCATATTTGggtgacaaaagaaaactGTTTCGCATTATGGACACCAAGTTGGAGGGCCAATACCCGCAGAAAGGAGCCTATACAGCTGCAACTCTTGCTCTACAATGCCTGAATCCTGAAGCCAAAGCAAGACCTTCAATGACAGAAGTTCTAGCAACACTTGAACAGATTGAGACCCCGAAAAATGCAGCCAAACACTCTCAAACAGAGCAGCAGCGTATAGCCCAAGTTCCTATCAGAAGGTCTCCTGCACGAAATAGGACCCCTCAAAATATGACTCCAACTGCATCCCCATTGCCATCTTACCGACAATCTCCTCGTGCACGTTA 1238 0.4362 MGNCLDSSAKVDAAQSSRTSASGISKTSPSSLSIQSYSEKSSNSSSLPTPRTEGEILSSPNLKSFTFNELRNATRNFRPDSLLGEGGFGCVYKGWIDAHTFTASKPGSGMVVAVKKLKPEGFQGHKEWLTEVHYLGQLHHRNLVKLIGYCLEGENRLLVYEFMPKGSLENHLFRRGPQPLSWSVRMKVAIGAAKGLAFLHNAQSQVIYRDFKASNILLDAEFNAKLSDFGLAKAGPTGDRTHVSTQVMGTHGYAAPEYVATGRLTAKSDVYSFGVVLLELLSGRRAVDRTKAGIEQNLVDWAKPYLGDKRKLFRIMDTKLEGQYPQKGAYTAATLALQCLNPEAKARPSMTEVLATLEQIETPKNAAKHSQTEQQRIAQVPIRRSPARNRTPQNMTPTASPLPSYRQSPRAR 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01021 412 ProSitePatterns Serine/Threonine protein kinases active-site signature. 206 218 IPR008271 GO:0004672|GO:0006468
Bva11g01021 412 PANTHER PROTEIN KINASE 2B, CHLOROPLASTIC 16 410 - -
Bva11g01021 412 MobiDBLite consensus disorder prediction 386 412 - -
Bva11g01021 412 MobiDBLite consensus disorder prediction 363 412 - -
Bva11g01021 412 MobiDBLite consensus disorder prediction 363 379 - -
Bva11g01021 412 MobiDBLite consensus disorder prediction 1 58 - -
Bva11g01021 412 CDD STKc_IRAK 83 360 - -
Bva11g01021 412 SUPERFAMILY Protein kinase-like (PK-like) 44 357 IPR011009 -
Bva11g01021 412 Gene3D Transferase(Phosphotransferase) domain 1 163 385 - -
Bva11g01021 412 Gene3D Phosphorylase Kinase; domain 1 53 162 - -
Bva11g01021 412 Pfam Protein tyrosine and serine/threonine kinase 81 356 IPR001245 GO:0004672|GO:0006468
Bva11g01021 412 ProSitePatterns Protein kinases ATP-binding region signature. 83 116 IPR017441 GO:0005524
Bva11g01021 412 MobiDBLite consensus disorder prediction 9 58 - -
Bva11g01021 412 PANTHER OS01G0588500 PROTEIN-RELATED 16 410 - -
Bva11g01021 412 ProSiteProfiles Protein kinase domain profile. 77 360 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01021 Bva-Chr11 11862351 11865078 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01021 53 357 Glycoside Hydrolase AT3G07070 53.247 1.04e-113 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIIa-2 Bva11g01021 PK_Tyr_Ser-Thr 2.3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01021 - - gmx:100809778 709.138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01457 08 7643106 7646247 Bva11g01021 11 11862351 11865078 BWGD
Bva11g01021 11 11862351 11865078 Bva11g01021 11 11862351 11865078 ECH