Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01019 ATGCAGAAGCAGCAGACGCAGCTAGGAAATGAAGAATCCAAGAAGAAGGAGCGCCACATTGTGACGTGGACTCAAGAGGAGGATGATATACTTAGAGAACAGATTGGCATCCATGGAACTGAAAACTGGTCAATTATTGCATCTAAATTCAAGGATAAGACAACAAGACAGTGTAGACGAAGATGGTACACGTACTTGAATTCTGATTTCAAAAAAGGAGGATGGTCACCGGAGGAAGACATACTCTTATGTGAGGCTCAGAAGATATTTGGTAACAGATGGACAGAAATAGCAAAAGTGGTTTCAGGAAGAACGGATAATGCTGTGAAAAACCGCTTCTCCACACTGTGCAAAAAGAGAGCAAAATATGAAGCCTTAGCAAAAGAGAACAACACTTCATACATCAATTCAAATAACAAAAGGATAATGTTACAACATGGTCCTAGTACAGATGCAACATCCGAGGCGGCACCTATGAAGAGGATGAGGAGGGCTCATATCTCAGATTCTGCAGCAAAGATCAGCTTTGGAGATAGATCTCATAAGCAGTGTGGAACAACAACAAATGAGCAGCGAAGAGCACCATTTGCAGTATTAGCTCCAAACTTCGATAAAGTCAACATCTTGCCAGACCAGCACCATGTCTGCAATGCCGAGTTCACCGTTGATgCTCAGAATAACAAGATTCAAGGAACGTTCCTGAAAAAGGATGACCCAAAGATAAGCGCATTGATGCAACAAGCAGAATTACTAAGTTCTCTAGCTTTAAAAGTTAATGCTGAGAACGTGGACCAGAGTCTTGAAAATGCATGGAAGATTCTCCAAGAGTTTCTGAACAGAAACAAAGAATCAGAtgttttcaaatataagatCCCAGATTTACAGATCCTAGATTTTAAAGATATTCTGGAGGACCTGAAGAGTAGCAATGAGGGAAGCCAGCCATGTTGGagGCAATCAGAATTATATGAGGACTCTCCAGGAAGTTCTGAATACAGCACAGGATCAACTCTCCTGCCTCAATTAGTCGGTGATAATTCAGAACATTCACTGCATCAGGATGTTGGAACTGAAATGAACTCTATCCAAATTGGAGATCAAAAAGGAGTAAATGTGTGCGAGAAAGAGGTTCTTTCTACTGAAACTGTGAATCAAGCAGATATCTTTCTATCCTGTGAGGAACAGATAAACAACGATGGCATTGCTTCTGCCTTATCAAGTACTGAGTTCAATTCCCCTGTTCAAGTTACCCGTCTTTTCAGGTCCTTGGCTGCAGGAATTCCCAGTCCACAGTTCTCAGACAGTGAAAGGAACTTCCTAATGAAAACGCTCGGAATAGAATCCCCATCCTCAAACCCAAGTGCCAATCCCTCACTACCACCACCCTGCAAAAGAGCCCTACTACATAGTTTATA 1415 0.4141 MQKQQTQLGNEESKKKERHIVTWTQEEDDILREQIGIHGTENWSIIASKFKDKTTRQCRRRWYTYLNSDFKKGGWSPEEDILLCEAQKIFGNRWTEIAKVVSGRTDNAVKNRFSTLCKKRAKYEALAKENNTSYINSNNKRIMLQHGPSTDATSEAAPMKRMRRAHISDSAAKISFGDRSHKQCGTTTNEQRRAPFAVLAPNFDKVNILPDQHHVCNAEFTVDAQNNKIQGTFLKKDDPKISALMQQAELLSSLALKVNAENVDQSLENAWKILQEFLNRNKESDVFKYKIPDLQILDFKDILEDLKSSNEGSQPCWRQSELYEDSPGSSEYSTGSTLLPQLVGDNSEHSLHQDVGTEMNSIQIGDQKGVNVCEKEVLSTETVNQDIFLSCEEQINNDGIASALSSTEFNSPVQVTRLFRSLAAGIPSPQFSDSERNFLMKTLGIESPSSNPSANPSLPPPCKRALLHSL 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01019 470 CDD SANT 22 66 IPR001005 -
Bva11g01019 470 Gene3D - 74 145 - -
Bva11g01019 470 SUPERFAMILY Homeodomain-like 19 113 IPR009057 -
Bva11g01019 470 SMART sant 71 119 IPR001005 -
Bva11g01019 470 SMART sant 19 68 IPR001005 -
Bva11g01019 470 Gene3D - 11 71 - -
Bva11g01019 470 ProSiteProfiles Myb-like domain profile. 23 66 IPR001005 -
Bva11g01019 470 PANTHER MYB PROTEIN-RELATED 11 467 - -
Bva11g01019 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 67 121 IPR017930 -
Bva11g01019 470 CDD SANT 75 116 IPR001005 -
Bva11g01019 470 PANTHER TRANSCRIPTION FACTOR MYB88 11 467 - -
Bva11g01019 470 Pfam Myb-like DNA-binding domain 23 83 - -
Bva11g01019 470 MobiDBLite consensus disorder prediction 308 334 - -
Bva11g01019 470 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 66 IPR017930 -
Bva11g01019 470 ProSiteProfiles Myb-like domain profile. 67 117 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01019 Bva-Chr11 11847619 11852832 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01019 8 318 MYB Transcription Factor Family AT2G02820 63.608 1.60e-142 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g01019 Myb_DNA-bind_6 1.1e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01019 K09422 - gmx:100807667 729.554
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01019 11 11847619 11852832 Bva11g01019 11 11847619 11852832 ECH