Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01016 ATGGTGGGGAATTCTGACTCAGTATCGATCCCGGTTCCCTACAAGAACCTGAGGGAGGCGGAAGTGGAATTAGTGGGAGCGGATGACGCACATCATCAGATCGACctcaattcttcttcttcttccaatgGATCACCTAACCAGTCTCCTGCTGTTTCTGCTGCACCGGCAAAAAACATTAGCTTGATAACTCTTGTTCTTAGTTGCACGGTTGCTGCCGGTGTTCAATTTGGATGGGCATTGCAGCTTTCTCTCTTGACCCCTTATATTCAGACACTCGGGATAGGACATgcgttttcttcatttatttggcTTTGTGGTCCTATTACTGGCCTCGTGGTTCAACCATGTGTTGGTATTTGGAGTGATAAATGCACTTCAAAGTATGGCAGAAGGCGTCCATTTATTCTTGCAGGATCTCTTATGATCTCACTAGCTGTGATATTAATCGGGTTTTCTGCAGACATTGGATATGCATTAGGAGACACACATGAGCATTGCAGTACATTTAAAGGGACCCGGACAAGAGCtgcttttgtatttattattggGTTCTGGATGCTGGACCTTGCCAACAATACAGTGCAGGGGCCAGCTCGTGCACTTTTGGCTGATCTGtcagGTCCTGATCAACGCAATGTAGCCAATGCTATATTTTGCTCATGGATGGCTGTTGGGAACATCCTTGGATATTCTTCAGGTGCTAGCGGAAAGTGGAATAAATGGTTTTCATTTCTGACGAATAAAGCATGCTGTGAAGCCTGTGGCAACCTTAAGGCAGCATTTCTTGTTGCTGTGGTGTTCCTGATATTATGCACACTTGTTACCATATATTTTGCTGATGAGGTTCCACTCACTGTGAATCAAACCCAACGCTCATCAGATTCTGCTCCTTTGTTGAATGGACAACAACAAAATggctttgaattttcaaaatcaaaacctgATTTACCTGTAATTGATGAGGCTAATGGGAAGATCATTGAGGATCACTATCGAAGGGATGTAAATCTAAAGCATGAGAACTTGAAAAACGAGGcagatcaaaatgaaaatttcatggATGGACCTGGAGCAGTGATGGTCAACTTGTTGACCAGTTTAAGGCATTTACCTCCTGCAATGCATTCGGTGCTTCTTGTCATGTTTCTCACTTGGTTATCATGGTTTCCCTTCTTTCTGTTTGATACGGATTGGATGGGGAGAGAAGTTTATCATGGAGATCCAAAAGGGAATTCTTctcaaataacattttacaaTCAAGGTGTCAGAGAAGGTGCATTTGGTTTGCTACTGAATTCTGTTGTCCTTGGAATTACCTCTTTCTTCATTGAACCAATGTGCAAATGGATGGGTGCAAGACTAGTATGGGCAATGAGCAACTTCGTTGTCTTTGTTTGCATGGCTGGCACTGCTATCATTGGTCTGATTTCCATCAATTATTCTCAAGGGATAGAACATGTACTTGGAGTAAATGGAGCAATCAAGGTCGCTTCGTTGGTTATTTTTGTTCTCCTTGGGTTTCCTCTCGCAATCACCTATAGTGTTCCCTTTGCTGTCACAGCAGAGTTGACTGCTGATTCAGGAGGTGGCCAAGGATTGGCTATTGGCGTCCTAAATCTTGCAATTGTTCTTCCTCAGATGATTGTATCCCTCGGTGCGGGTCCATGGGATGCTCTTTTTGGTGGAGGAAATCAACCTGCCTTTGTTTTGGCTGCCCTTTCTTCTCTTGCTGGTGGTGTGATTGCAACTCTTAAGCTGCCACATATGTCTAGCAGTTCTTTCAAGTCATCAGGATTTCATTTTGGCTA 1811 0.4092 MVGNSDSVSIPVPYKNLREAEVELVGADDAHHQIDLNSSSSSNGSPNQSPAVSAAPAKNISLITLVLSCTVAAGVQFGWALQLSLLTPYIQTLGIGHAFSSFIWLCGPITGLVVQPCVGIWSDKCTSKYGRRRPFILAGSLMISLAVILIGFSADIGYALGDTHEHCSTFKGTRTRAAFVFIIGFWMLDLANNTVQGPARALLADLSGPDQRNVANAIFCSWMAVGNILGYSSGASGKWNKWFSFLTNKACCEACGNLKAAFLVAVVFLILCTLVTIYFADEVPLTVNQTQRSSDSAPLLNGQQQNGFEFSKSKPDLPVIDEANGKIIEDHYRRDVNLKHENLKNEADQNENFMDGPGAVMVNLLTSLRHLPPAMHSVLLVMFLTWLSWFPFFLFDTDWMGREVYHGDPKGNSSQITFYNQGVREGAFGLLLNSVVLGITSFFIEPMCKWMGARLVWAMSNFVVFVCMAGTAIIGLISINYSQGIEHVLGVNGAIKVASLVIFVLLGFPLAITYSVPFAVTAELTADSGGGQGLAIGVLNLAIVLPQMIVSLGAGPWDALFGGGNQPAFVLAALSSLAGGVIATLKLPHMSSSSFKSSGFHFG 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01016 603 PANTHER SUCROSE TRANSPORT PROTEIN SUC3 34 603 - -
Bva11g01016 603 CDD MFS_SLC45_SUC 65 583 - -
Bva11g01016 603 Pfam MFS/sugar transport protein 80 230 - -
Bva11g01016 603 SUPERFAMILY MFS general substrate transporter 65 590 IPR036259 -
Bva11g01016 603 Gene3D MFS general substrate transporter like domains 61 586 IPR036259 -
Bva11g01016 603 PANTHER SUGAR TRANSPORTER 34 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01016 Bva-Chr11 11818890 11824221 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01016 148 603 Sucrose Transporter Gene Family AT2G02860 69.803 0.0 650
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01016 K15378 - gmx:100793185 936.791
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01016 11 11818890 11824221 Bva11g01016 11 11818890 11824221 ECH