Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01014 ATGTCTAGCAGAAGATCATCCCGTTCGAGACAATCGGGTGTTTCCAGCGCCGAGATCACCGATGCTCAGATCAACGATCTCGTCTCCAAGTTGCAGCAACTCATCCCTGAGCTCCGAGCCAGGCGCTCCGACAAGGTTTCCGCGGCGAAGGTGTTGCAGGAGACTTGCAACTACATCAAGAACTTGCACAGAGAAGTTGATGATCTAAGTGACCGATTATCTCAGCTTTTGGCCAACACTGACTCCGATAGTGCTCAGGCAGCCATTATTAGGAGCTTacttatgta 287 0.4983 MSSRRSSRSRQSGVSSAEITDAQINDLVSKLQQLIPELRARRSDKVSAAKVLQETCNYIKNLHREVDDLSDRLSQLLANTDSDSAQAAIIRSLLM 95
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01014 95 Coils Coil 59 79 - -
Bva11g01014 95 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 23 81 IPR036638 GO:0046983
Bva11g01014 95 PANTHER TRANSCRIPTION FACTOR PRE6 1 95 - -
Bva11g01014 95 Pfam Helix-loop-helix DNA-binding domain 23 62 IPR011598 GO:0046983
Bva11g01014 95 CDD bHLH_AtPRE_like 19 79 - -
Bva11g01014 95 Gene3D - 21 91 IPR036638 GO:0046983
Bva11g01014 95 PANTHER TRANSCRIPTION FACTOR PRE 1 95 IPR044293 GO:0006355|GO:0040008|GO:0046983
Bva11g01014 95 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 8 62 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01014 Bva-Chr11 11810769 11811428 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01014 19 94 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G74500 77.922 1.28e-35 115
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bva11g01014 HLH 4e-07 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01014 - - gmx:100804830 153.68
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g01014 11 11810769 11811428 Bva11g01014 11 11810769 11811428 ECH
Bva11g01014 11 11810769 11811428 Bva06g01242 06 9564405 9565147 ECH
Bva11g01014 11 11810769 11811428 Bva05g00459 05 2264609 2264994 ECH