Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g01006 ATGGAAGCAGCAGCCGCAGATCATCAAAATGGAATCCGAAGACCCAATTTCCCTCTTCAGCTCTTAGAGAAGAAAGATGATGAACCAGCTTGTTCTACTTCAAATTATACCTCCGCCACTACTATGGGCGAAACCAGCTCCGACCCGACCCGTGTTGGATCCGAGCAGGCCAAGAAACCGCCGCCCAAGAGGACCTCGACCAAGGACAGGCACACCAAAGTTGACGGCCGCGGCCGCCGGATCCGTATGCCTGCCGCGTGTGCCGCCAGAGTTTTTCAACTAACTAGAGAGCTAGGCCATAAGTCTGACGGCGAAACCATCGAGTGGCTGCTTCAACAGGCCGAGCCGGCGGTGATCGCTGCAACGGGCACCGGGACCATTCCCGCGAATTTCACTTCTCTCAACATCTCGCTCCGCAGCTCTGGCTCCACCATGTCGGCGCCTTCGCACTATTTCCGAAACAGTTACTTCAATCCGAACTTCTCGGTGGCGAGCCAGCTACGGACACGCGGCGAGTGGGAGCGGAGCATGGTCATGGAAGACTCTAGAAGGATCCTCTTCCCCGGTGCTGTCACGGAGAATTCCGCTATATCTCCTGTTTTGAATTTCAATTCTGCTAATAATGTGAATGCCATTCTCCAAGCAAAGCCAGAGCTCCGGGAAGAAGCCGGCGGCGGAGGCAACGGCAACGGCAGCGGCCTCGAGTTGGCAACGAGTACGACGTCAGATTCCGAGACCGGTatgggaagaaagagaagaccGGAGCAAGAGCTGTCCCAAAGTCAGATGGGAAGTTACTTGCTACAATCAAGTTCGGGTTCAATTCCGGCGAGTCATAGTTCAACTCCGGGAACGTTTTGGATGGTAAGTAGCCCCGCTAACAGTGGGATGGGCGGTGGCAGCGGCGGTAATAACATTGATCCCATATGGGCAATTCCGTCGGTTGGAAATAGTAACATGTATAGAAATGCTGCTTTATCCGGTGGGAtacattttatgaattttgcatCTCCAATGCCTCTCGGGCCCGGGCAGCAATTAGGTTCAGTAACGGAAAGCAACCTAGGCATGCTCGCAGCACTCAATGCTTATAGGCAAATCCCGGCGAACGGTGGGGTCATGGACTCTACGGGGACCGCCGGGCATCACGGAGGAGACGACGGACACGAAACACACAATCAACATTG 1187 0.5307 MEAAAADHQNGIRRPNFPLQLLEKKDDEPACSTSNYTSATTMGETSSDPTRVGSEQAKKPPPKRTSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRNSYFNPNFSVASQLRTRGEWERSMVMEDSRRILFPGAVTENSAISPVLNFNSANNVNAILQAKPELREEAGGGGNGNGSGLELATSTTSDSETGMGRKRRPEQELSQSQMGSYLLQSSSGSIPASHSSTPGTFWMVSSPANSGMGGGSGGNNIDPIWAIPSVGNSNMYRNAALSGGIHFMNFASPMPLGPGQQLGSVTESNLGMLAALNAYRQIPANGGVMDSTGTAGHHGGDDGHETHNQH 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g01006 395 MobiDBLite consensus disorder prediction 258 282 - -
Bva11g01006 395 MobiDBLite consensus disorder prediction 1 78 - -
Bva11g01006 395 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 14 395 IPR005333 GO:0003700
Bva11g01006 395 MobiDBLite consensus disorder prediction 220 282 - -
Bva11g01006 395 MobiDBLite consensus disorder prediction 372 395 - -
Bva11g01006 395 MobiDBLite consensus disorder prediction 57 78 - -
Bva11g01006 395 ProSiteProfiles TCP domain profile. 67 121 IPR017887 -
Bva11g01006 395 MobiDBLite consensus disorder prediction 31 53 - -
Bva11g01006 395 PANTHER TCP FAMILY TRANSCRIPTION FACTOR 14 395 - -
Bva11g01006 395 Pfam TCP family transcription factor 65 179 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g01006 Bva-Chr11 11756920 11758560 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g01006 57 346 TCP Transcription Factor Family AT3G47620 45.566 8.52e-55 186
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Bva11g01006 TCP 6e-38 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g01006 - - gmx:100781296 470.314
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva08g01472 08 7761775 7763335 Bva11g01006 11 11756920 11758560 BWGD
Bva11g01006 11 11756920 11758560 Bva11g01006 11 11756920 11758560 ECH