Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00989 ATGGATGAGAGAAATGATACTGAGAAACTTGATGAAGTTATGCTACCAGGGTTTAGGTTTCATCCAACTGACGAGGAACTTGTTGGGTTTTATCTTAGAAGAAAGATTCAGCAGAGGCCTCTCTCTATTGAACTCATCAAGCAGCTTGATATCTACAAATATGATCCATGGGATCTTCCAAAGTTAGCCACTAcaggagagagagagtggtATTTTTACTGCCCAAGAGACAGAAAATACAGAAACAGTGCAAGGCCTAATAGGGTAACAGGAGCTGGGTTCTGGAAAGCCACGGGAACTGATAGGCCCATTTACTCCTCTGAGGGTTCAAAGTGCATAGGGCTGAAGAAATCCCTTGTTTTCTACAGAGGTAGAGCTGCCAAAGGAGTCAAAACAGATTGGATGATGCATGAGTTCCGCTTGCCTTCTCTCATAGACTCATCTCCCAAGAAGTACATAGACAAGACCATTCCAgctaatGATTCATGGGCAATATGCAGGATATTCAAGAAAACTAACTCTACAGCTCAAAAAGCTCTTTCTCAATGTTGGGTCTCTCCTTCACCTGAAACAAACACCTCTGATTTGCTAACCAAAGATGAAGCTAGTCCTCAGTTTTGTTCAGAGTCATTGACAAAGAAAACTGGCTTTAACAGCCAGTTTTACACTAACCACAGTGACTTACAACACTTTGCCACTAGTAACTGCAGCACTCTTTGTGGCTTAGAGAGTGGTTCTTACAAACCCATTATTAATCCACTGCTTTATAAACCCTTTGATCAATTGCCCATTTCAAATGGAGACCTTACCACTAGTTTAACTTTTTCATCTCCACTTGAAACTTGTACACTTACTGCCAAACCCTCAGTGGATGTTTCTTCCATGTTGCTGAATATGTCATCTTCTGTGTTAGGAGATTTTGGTAAAGTCTCTGAGGGTATGAACTTTGGCGGGTTTCAAGAGAATGGTCATAATGGTAATTATCCTATGCCTTTGTTACGTGAGTTGCAAGGGACACTTGGCAATGTAGATGATAATTCAATGGTGAAGATTAATCATAATGTGAATGTAGCTCGTGGGGATGTGCAAGAGTTGGAGACCGCAGTTCGATCTATTGGGTTTCCATACAGTTTGCCTTTGAATATTGGGGAAGCATGGAAGTCAAATCTCCTTTGGGATGCTTCCTCTTGTCCCTTGTG 1199 0.4062 MDERNDTEKLDEVMLPGFRFHPTDEELVGFYLRRKIQQRPLSIELIKQLDIYKYDPWDLPKLATTGEREWYFYCPRDRKYRNSARPNRVTGAGFWKATGTDRPIYSSEGSKCIGLKKSLVFYRGRAAKGVKTDWMMHEFRLPSLIDSSPKKYIDKTIPANDSWAICRIFKKTNSTAQKALSQCWVSPSPETNTSDLLTKDEASPQFCSESLTKKTGFNSQFYTNHSDLQHFATSNCSTLCGLESGSYKPIINPLLYKPFDQLPISNGDLTTSLTFSSPLETCTLTAKPSVDVSSMLLNMSSSVLGDFGKVSEGMNFGGFQENGHNGNYPMPLLRELQGTLGNVDDNSMVKINHNVNVARGDVQELETAVRSIGFPYSLPLNIGEAWKSNLLWDASSCPL 399
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00989 399 Gene3D NAC domain 23 176 IPR036093 GO:0003677|GO:0006355
Bva11g00989 399 PANTHER PROTEIN FEZ ISOFORM X1 1 398 - -
Bva11g00989 399 ProSiteProfiles NAC domain profile. 14 171 IPR003441 GO:0003677|GO:0006355
Bva11g00989 399 Pfam No apical meristem (NAM) protein 16 141 IPR003441 GO:0003677|GO:0006355
Bva11g00989 399 SUPERFAMILY NAC domain 13 171 IPR036093 GO:0003677|GO:0006355
Bva11g00989 399 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 1 398 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00989 Bva-Chr11 11682063 11683670 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00989 1 307 NAC Transcription Factor Family AT1G26870 53.681 6.10e-107 319
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bva11g00989 NAM 6.6e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00989 - - vun:114179488 528.094
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00989 11 11682063 11683670 Bva11g00989 11 11682063 11683670 ECH