Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00985 ATGAGCGATCATTTGGTGTTGTATGTGGACCGTCTTGAAGGGCCTGTGCCCGATGAATCGGTGACCCAGGCGGCTGGGGCTCCTTCGGAGCCGGCTGCAGGTGGTGTGTCCGTGGATGCTGCGGGGCCGTCTGGTTCAGCACCTCCGGCGGATGATGCTCGGTCGGAGCATGGTGAGGATTGTAATGAGGATGAGCCGTTGATCCAATCTGCGGAATGTCGCATTTGCCAAGAGGAGGACAGCGTTAAGAATTTGGAGACGCCTTGTACTTGCAGCGGCAGCCTAAAgTATGCTCACAGGAAGTGTGTCCAGCATTGGTGCAATGAGAAAGGAGACATAACTTGTGAAATATGTCATCAGCCTTATCAACCTGATTATACTGCCCCACCTCCCCGCCCTCATCCTGAAGAAACTACCATTGATATAGGCGGAGGCTGGACAATCTCTGGCACACCATTGGACTTGCGTGATCCTCGGCTCTTGGCAATTGCAGAGGCAGAACGCCAGTTCTTGGAAGCTGAATACGATGAATATGCAGCATCTAATGCCAGTGGAGCTGCATTCTGCCGCTCAGCCGCCCTCATTTTAATGGCCCTTTTACTCTTGCGGCATGCACTGTCTGTCACAGATGCTGATGCCGATGATGATCCATCAACATTTTTCTCTCTTTTCTTACTTCGGGCAGCTGGATTTCTTTTACCTTGTTATATCATGGCTTGGGCAATCAGTATCTTGCAGCGTCGGCGGCAAAGACAGGAGGCAGCAGCACTGGCGGCGACTCAAGTTGCTTTTGTTCTACAATCTGGACAGCCTAGAGGTCTGCAATTTGCGATTGCACCAGGGCCACCAGCAGTGAATACACAGCAGGAAGTTGAACGTGTTTA 884 0.5181 MSDHLVLYVDRLEGPVPDESVTQAAGAPSEPAAGGVSVDAAGPSGSAPPADDARSEHGEDCNEDEPLIQSAECRICQEEDSVKNLETPCTCSGSLKYAHRKCVQHWCNEKGDITCEICHQPYQPDYTAPPPRPHPEETTIDIGGGWTISGTPLDLRDPRLLAIAEAERQFLEAEYDEYAASNASGAAFCRSAALILMALLLLRHALSVTDADADDDPSTFFSLFLLRAAGFLLPCYIMAWAISILQRRRQRQEAAALAATQVAFVLQSGQPRGLQFAIAPGPPAVNTQQEVERV 294
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00985 294 ProSiteProfiles Zinc finger RING-CH-type profile. 65 125 IPR011016 GO:0008270
Bva11g00985 294 Pfam RING-variant domain 73 118 IPR011016 GO:0008270
Bva11g00985 294 PANTHER E3 UBIQUITIN-PROTEIN LIGASE MARCH-RELATED 1 284 - -
Bva11g00985 294 PANTHER RING/FYVE/PHD ZINC FINGER DOMAIN-CONTAINING 1 284 IPR033275 -
Bva11g00985 294 MobiDBLite consensus disorder prediction 1 64 - -
Bva11g00985 294 CDD RING_CH-C4HC3_MARCH 73 119 - -
Bva11g00985 294 Coils Coil 161 181 - -
Bva11g00985 294 SMART ringv_2 72 119 IPR011016 GO:0008270
Bva11g00985 294 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 58 129 IPR013083 -
Bva11g00985 294 Pfam Protein of unknown function (DUF3675) 124 242 IPR022143 -
Bva11g00985 294 SUPERFAMILY RING/U-box 70 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00985 Bva-Chr11 11667614 11670923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00985 72 119 C3H Transcription Factor Family AT2G37950 43.137 7.05e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00985 - - gmx:100779674 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00985 11 11667614 11670923 Bva11g00985 11 11667614 11670923 ECH