Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00978 ATGATAAGGAACAGAGACCTCTCTCTGTTCCTACCCTTCTTCTTTGGCTTGTCAATTGCTTCACCCAGAAGAGATGGTCAAGACCAGGATCAGGAAAGTGGCAGTACTGAAACTTCGCAGCGTGGAAGAATCATCTTGATAAACCCACTCACCCAGGGCATGGTTGTGATTGATGGGACTTCGAGCCTTGAGGCTCTGTTCAGTGAATTGGGTAGCAACAAGGGTGGGCAACCTCCAGCGTCCAAGGATTCCATAGATGACATGCCAAGTGTTGAGATtggtgaagatgaagatgggGAGTGTGTTATTTGTTTGGAGGAGTGGGAGGCTGGTAATGTGGCAAAAAAGATGCCTTGTGAGCATAAATTTCACCCCAATTGCATTGAGAAATGGTTGGGCATTCATGGTTCTTGCCTAGTTTGCAGGTACCAGATGCCTGTGGATGAGAAAGATGTGGACAAGAACAGAGATGAAGAAGGGGGAGAGAGGAGGAGGGGTGAAGTGTGGGTTAGTTTCTCTTTCAATCCTAGTAGGAGAAGTGAGGATTCAAATCCAGCTCCTTCAGCTGATTCCACTGTTTCTCCATCAAGTCCAAGAGCTGATTCTGAGGTAGAAAGTTA 620 0.4532 MIRNRDLSLFLPFFFGLSIASPRRDGQDQDQESGSTETSQRGRIILINPLTQGMVVIDGTSSLEALFSELGSNKGGQPPASKDSIDDMPSVEIGEDEDGECVICLEEWEAGNVAKKMPCEHKFHPNCIEKWLGIHGSCLVCRYQMPVDEKDVDKNRDEEGGERRRGEVWVSFSFNPSRRSEDSNPAPSADSTVSPSSPRADSEVES 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00978 206 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 68 148 IPR013083 -
Bva11g00978 206 PANTHER E3 UBIQUITIN-PROTEIN LIGASE PRAJA 3 153 - -
Bva11g00978 206 MobiDBLite consensus disorder prediction 174 206 - -
Bva11g00978 206 SUPERFAMILY RING/U-box 91 148 - -
Bva11g00978 206 ProSiteProfiles Zinc finger RING-type profile. 101 142 IPR001841 -
Bva11g00978 206 PANTHER - 3 153 - -
Bva11g00978 206 MobiDBLite consensus disorder prediction 69 90 - -
Bva11g00978 206 SMART ring_2 101 141 IPR001841 -
Bva11g00978 206 Pfam Ring finger domain 100 142 IPR001841 -
Bva11g00978 206 MobiDBLite consensus disorder prediction 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00978 Bva-Chr11 11644975 11645595 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00978 1 191 C3H Transcription Factor Family AT1G26800 50.000 6.71e-59 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00978 - - zju:107429014 254.218
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00978 11 11644975 11645595 Bva11g00978 11 11644975 11645595 ECH