Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00976 ATGGATCTGCAAAATCGAGGTATGCATCTGGTTTTGTCCACTGATGCCAAGCCAAGGCTAAAATGGATTCCTGAGCTTCACCAGCGATTCCTCGACGCGGTTAATCAGCTTGGAGGGCCAGAAAAGGCAACACCAAAGGGTCTTATGAGGGTGATGGGGATTCCAGGACTAACCTTGTACCACCTCAAGAGCCATTTGCAgAAATTCAGACTTGGGAAAAGCCAACAGATAGAGATTTCTTCTGACAGCAAACAAGAAGATTACAGAGAAGTCCACAGCAGTGATGGTCACTGCAGAAGGGAAATCAGTATTGGAACCCAGAATCAGATGACTGaAGGCTTGCAGATAGCTCAGGCTTTCCAAGTGCAAATGGAAGTGCAAAGGAAGCTCTATGAACAAATTGAGGTTCAAAGACATTTGCAGCTTCGGATTGAAGCTCAAGGGAAATATCTCCAATCAGTGCTGAAGAATGCGCAGGAAGCACTTTCTGGACACAATTCTTCTGCAGCCGGTATAGAACTCGCGAAAGCCGAGCTCTCTAAGTTACTTTCTATAATCAACAATGGCTGCCCGGGTTCGCCAATCTCAGAACTCACAGAAACAAGAGTGTTGGGTTTcaaaaatggagaaaggaaACAAAGCAGAGGAACCATGTGTTCATTGGAGAGTTCCTTGACATCTTCAGAGAGCTctgggagaaagaaagagaagcagCCCATGGAAGAGACTCAAAAATCTAACACTATTTCCTTTGAATTGACATTAATGGCCATTCACCCAGAAGATAAACCATGCAAGGTTGAGGCTAGTGGGAGGAAGAGAAGTGGAGGGACAGATTCTGATGAGAGCTGTGTTGATCAACCATGTGGTAACAAGTTGAGAAGACTCGAAGTCGCACAAATGCTTGACTTGAACAGCTTATATCAGAATGATGAATCAAGTTCAAAAGGAATAGACTTGAATTCCTA 968 0.4246 MDLQNRGMHLVLSTDAKPRLKWIPELHQRFLDAVNQLGGPEKATPKGLMRVMGIPGLTLYHLKSHLQKFRLGKSQQIEISSDSKQEDYREVHSSDGHCRREISIGTQNQMTEGLQIAQAFQVQMEVQRKLYEQIEVQRHLQLRIEAQGKYLQSVLKNAQEALSGHNSSAAGIELAKAELSKLLSIINNGCPGSPISELTETRVLGFKNGERKQSRGTMCSLESSLTSSESSGRKKEKQPMEETQKSNTISFELTLMAIHPEDKPCKVEASGRKRSGGTDSDESCVDQPCGNKLRRLEVAQMLDLNSLYQNDESSSKGIDLNS 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00976 322 MobiDBLite consensus disorder prediction 213 228 - -
Bva11g00976 322 MobiDBLite consensus disorder prediction 262 280 - -
Bva11g00976 322 Gene3D - 16 74 - -
Bva11g00976 322 SUPERFAMILY Homeodomain-like 16 72 IPR009057 -
Bva11g00976 322 Pfam MYB-CC type transfactor, LHEQLE motif 114 160 IPR025756 -
Bva11g00976 322 MobiDBLite consensus disorder prediction 209 249 - -
Bva11g00976 322 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 3 321 IPR044848 GO:0003700
Bva11g00976 322 PANTHER MYB-LIKE TRANSCRIPTION FACTOR FAMILY PROTEIN 3 321 - -
Bva11g00976 322 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 17 72 IPR006447 GO:0003677
Bva11g00976 322 MobiDBLite consensus disorder prediction 262 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00976 Bva-Chr11 11640614 11642194 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00976 8 288 G2-like Transcription Factor Family AT1G69580 52.542 5.40e-80 245
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Bva11g00976 Myb_CC_LHEQLE 1e-19 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00976 - - gmx:100787178 427.943
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00976 11 11640614 11642194 Bva11g00976 11 11640614 11642194 ECH