Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bva11g00974 atgggAATGGGGCTCTATGCTGACATGGGTTCTCTTTCTCTTAGCTCCAACTATGCTGCTGTTTCTTCATCTCAAGAGAGTTATGCCTGCAAGAGCTCTGAGATGGATCAAAATGGGGGCACGTGCTGGACTTTTCCATTTATGAGGGATTGCCTTGGTAGAAACCTTGAGGAGCGCCCCAATAGTGATGTTTTGGAAGAGAAACCTTCTGATTGCAGTGATGGGATTGGggaaaatattgagaaaatggACAATAATGCAAGCCCTAATGAAGAGAACCCTAATGAGAATTCTGCAGCCAGTGGTAGCAAGGAGGCAGATACTGGCCAATCCAAACTCTGTGCAAGAGGGCACTGGAGGCCTGCAGAAGATGCGAAGCTAAAGGAACTTGTGGCCCTTTATGGGCCTCAAAACTGGAACCTTATAGCAGAGAAGCTAGAAGGAAGATCAGGTAAGAGCTGTAGGCTCAGATGGTTCAACCAGTTGGACCCGAGGATCAATAGGAGAGCCTTTactgaagaagaggaagagagattgaTGCAGGCACATAGAATATACGGCAACAAATGGGCCATGATTGCTAGGCTTTTCCCTGGAAGAACTGATAATGCTGTCAAGAATCATTGGCATGTGATAATGGCTAGAAAGTACAGAGAACAATCCAGTGCTTACAGGAGGAGGAAGCTAAGCCAATCGGTATACAGAAGAATGGAGGAAAATCCAAGCTTTGTCTGCAGAGATCCAATCAGTGCAGGGACAGAACCACCGCCCTATGTTCTCAATCTCCCCAATGGAGGACTCAGCAACATGGTTAGCAATTTCCCATATGGATCTTTCAATGGAGCAGCAGCAGGTGGTGGGGTTGACTATGGCTTGAATGGTTCACCCCACATGACTGGTGGGAGAGAAGCAATCTCAAGTAACAAGCAGGCCCCTGCTCATTCTGCTATTGATTACCTCTCCGGTGCCAGAATCAATGACATGGTGGGTGTGGGTGGGGTTTTGATCCAAAACAGATACTGGGACAGGACAAGTGATGATCATCAACATCATAtagcaacagcagcagcagcagctaGTTTCTATGCTCATGGGATTTATCCCCCGTGTAATATGATGCCAATGCAACAGTCAAACTCAAGCAGTCACAATTTTTACAGTTTCTCATCAAATTCCACAGTTGTAGCTGCAGCAGCAGCACCCCACGTTTTGGGCTGTGAACCTTCGTCATCCATGGCAGAGAACAGAGACCAAGTCAGTCACCAccaccatcatcatcatcctgATCCCGTTCCACCACCATTTATTGACTTTCTCGGAGTTGGAGCCACCTG 1334 0.4393 MGMGLYADMGSLSLSSNYAAVSSSQESYACKSSEMDQNGGTCWTFPFMRDCLGRNLEERPNSDVLEEKPSDCSDGIGENIEKMDNNASPNEENPNENSAASGSKEADTGQSKLCARGHWRPAEDAKLKELVALYGPQNWNLIAEKLEGRSGKSCRLRWFNQLDPRINRRAFTEEEEERLMQAHRIYGNKWAMIARLFPGRTDNAVKNHWHVIMARKYREQSSAYRRRKLSQSVYRRMEENPSFVCRDPISAGTEPPPYVLNLPNGGLSNMVSNFPYGSFNGAAAGGGVDYGLNGSPHMTGGREAISSNKQAPAHSAIDYLSGARINDMVGVGGVLIQNRYWDRTSDDHQHHIATAAAAASFYAHGIYPPCNMMPMQQSNSSSHNFYSFSSNSTVVAAAAAPHVLGCEPSSSMAENRDQVSHHHHHHHPDPVPPPFIDFLGVGAT 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bva11g00974 444 SMART sant 167 215 IPR001005 -
Bva11g00974 444 SMART sant 115 164 IPR001005 -
Bva11g00974 444 MobiDBLite consensus disorder prediction 83 108 - -
Bva11g00974 444 SUPERFAMILY Homeodomain-like 116 209 IPR009057 -
Bva11g00974 444 MobiDBLite consensus disorder prediction 61 78 - -
Bva11g00974 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 163 217 IPR017930 -
Bva11g00974 444 CDD SANT 170 210 IPR001005 -
Bva11g00974 444 MobiDBLite consensus disorder prediction 408 434 - -
Bva11g00974 444 ProSiteProfiles Myb-like domain profile. 116 162 IPR001005 -
Bva11g00974 444 PANTHER MYB TRANSCRIPTION FACTOR 3 444 - -
Bva11g00974 444 Gene3D - 116 167 - -
Bva11g00974 444 MobiDBLite consensus disorder prediction 61 111 - -
Bva11g00974 444 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 116 162 IPR017930 -
Bva11g00974 444 CDD SANT 119 160 IPR001005 -
Bva11g00974 444 ProSiteProfiles Myb-like domain profile. 163 213 IPR001005 -
Bva11g00974 444 Pfam Myb-like DNA-binding domain 116 162 IPR001005 -
Bva11g00974 444 Pfam Myb-like DNA-binding domain 168 211 IPR001005 -
Bva11g00974 444 PANTHER MYB PROTEIN-RELATED 3 444 - -
Bva11g00974 444 Gene3D - 169 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bva11g00974 Bva-Chr11 11624697 11626484 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bva11g00974 87 241 MYB Transcription Factor Family AT1G69560 72.561 2.61e-77 243
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bva11g00974 Myb_DNA-binding 1.6e-14 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Bva11g00974 K09422 - vvi:100253313 473.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bva11g00974 11 11624697 11626484 Bva11g00974 11 11624697 11626484 ECH